Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh19Q80TF3 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Pcdh19Q80TF3 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Pcdh19Q80TF3 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh19Q80TF3 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh19Q80TF3 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh19Q80TF3 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh19Q80TF3 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh19Q80TF3 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh19Q80TF3 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh19Q80TF3 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15.29■□□□□ 0.04
Pcdh19Q80TF3 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh19Q80TF3 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh19Q80TF3 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Pcdh19Q80TF3 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh19Q80TF3 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh19Q80TF3 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC15.29■□□□□ 0.04
Pcdh19Q80TF3 Gm9727-201ENSMUST00000161387 555 ntBASIC15.29■□□□□ 0.04
Pcdh19Q80TF3 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh19Q80TF3 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh19Q80TF3 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh19Q80TF3 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC15.29■□□□□ 0.04
Pcdh19Q80TF3 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC15.29■□□□□ 0.04
Pcdh19Q80TF3 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh19Q80TF3 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh19Q80TF3 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh19Q80TF3 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh19Q80TF3 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Pcdh19Q80TF3 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh19Q80TF3 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh19Q80TF3 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Pcdh19Q80TF3 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.29■□□□□ 0.04
Pcdh19Q80TF3 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh19Q80TF3 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh19Q80TF3 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh19Q80TF3 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh19Q80TF3 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh19Q80TF3 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh19Q80TF3 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh19Q80TF3 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh19Q80TF3 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh19Q80TF3 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh19Q80TF3 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh19Q80TF3 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh19Q80TF3 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh19Q80TF3 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh19Q80TF3 Gm11779-201ENSMUST00000118541 368 ntBASIC15.28■□□□□ 0.04
Pcdh19Q80TF3 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC15.28■□□□□ 0.04
Pcdh19Q80TF3 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh19Q80TF3 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC15.28■□□□□ 0.04
Pcdh19Q80TF3 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.28■□□□□ 0.04
Pcdh19Q80TF3 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Pcdh19Q80TF3 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh19Q80TF3 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh19Q80TF3 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh19Q80TF3 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh19Q80TF3 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh19Q80TF3 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh19Q80TF3 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh19Q80TF3 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Pcdh19Q80TF3 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh19Q80TF3 Gm11873-201ENSMUST00000117877 1304 ntBASIC15.27■□□□□ 0.04
Pcdh19Q80TF3 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC15.27■□□□□ 0.04
Pcdh19Q80TF3 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh19Q80TF3 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Pcdh19Q80TF3 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh19Q80TF3 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.27■□□□□ 0.04
Pcdh19Q80TF3 Gm43332-201ENSMUST00000202511 1044 ntBASIC15.27■□□□□ 0.04
Pcdh19Q80TF3 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh19Q80TF3 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh19Q80TF3 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh19Q80TF3 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh19Q80TF3 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdh19Q80TF3 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.27■□□□□ 0.03
Pcdh19Q80TF3 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.27■□□□□ 0.03
Pcdh19Q80TF3 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.27■□□□□ 0.03
Pcdh19Q80TF3 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC15.27■□□□□ 0.03
Pcdh19Q80TF3 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdh19Q80TF3 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdh19Q80TF3 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdh19Q80TF3 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdh19Q80TF3 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdh19Q80TF3 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdh19Q80TF3 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
Pcdh19Q80TF3 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdh19Q80TF3 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Pcdh19Q80TF3 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Pcdh19Q80TF3 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh19Q80TF3 AC122901.1-201ENSMUST00000214203 1790 ntBASIC15.26■□□□□ 0.03
Pcdh19Q80TF3 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh19Q80TF3 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh19Q80TF3 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh19Q80TF3 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh19Q80TF3 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh19Q80TF3 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh19Q80TF3 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Pcdh19Q80TF3 Gm11594-201ENSMUST00000122313 162 ntBASIC15.26■□□□□ 0.03
Pcdh19Q80TF3 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Pcdh19Q80TF3 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC15.26■□□□□ 0.03
Pcdh19Q80TF3 Gm18489-201ENSMUST00000172565 551 ntBASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms