Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Npc1l1Q6T3U4 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Npc1l1Q6T3U4 Gm7229-201ENSMUST00000214719 1007 ntBASIC18.65■□□□□ 0.58
Npc1l1Q6T3U4 AC122024.2-201ENSMUST00000220086 871 ntBASIC18.65■□□□□ 0.58
Npc1l1Q6T3U4 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Npc1l1Q6T3U4 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Npc1l1Q6T3U4 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Npc1l1Q6T3U4 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Npc1l1Q6T3U4 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Npc1l1Q6T3U4 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Npc1l1Q6T3U4 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Npc1l1Q6T3U4 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Npc1l1Q6T3U4 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Npc1l1Q6T3U4 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC18.64■□□□□ 0.58
Npc1l1Q6T3U4 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Npc1l1Q6T3U4 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC18.64■□□□□ 0.57
Npc1l1Q6T3U4 Gm11185-201ENSMUST00000117732 1007 ntBASIC18.64■□□□□ 0.57
Npc1l1Q6T3U4 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Npc1l1Q6T3U4 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Npc1l1Q6T3U4 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC18.64■□□□□ 0.57
Npc1l1Q6T3U4 Gm7286-201ENSMUST00000182691 1007 ntBASIC18.64■□□□□ 0.57
Npc1l1Q6T3U4 Gm45167-201ENSMUST00000208007 322 ntBASIC18.64■□□□□ 0.57
Npc1l1Q6T3U4 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Npc1l1Q6T3U4 AC131709.1-201ENSMUST00000224731 1180 ntBASIC18.64■□□□□ 0.57
Npc1l1Q6T3U4 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Npc1l1Q6T3U4 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Npc1l1Q6T3U4 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Npc1l1Q6T3U4 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Npc1l1Q6T3U4 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Npc1l1Q6T3U4 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC18.63■□□□□ 0.57
Npc1l1Q6T3U4 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC18.63■□□□□ 0.57
Npc1l1Q6T3U4 AC093043.3-201ENSMUST00000226531 2273 ntBASIC18.63■□□□□ 0.57
Npc1l1Q6T3U4 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Npc1l1Q6T3U4 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Npc1l1Q6T3U4 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC18.63■□□□□ 0.57
Npc1l1Q6T3U4 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Npc1l1Q6T3U4 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Npc1l1Q6T3U4 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC18.63■□□□□ 0.57
Npc1l1Q6T3U4 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Npc1l1Q6T3U4 Gm9682-201ENSMUST00000197505 556 ntBASIC18.63■□□□□ 0.57
Npc1l1Q6T3U4 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC18.63■□□□□ 0.57
Npc1l1Q6T3U4 Gm44945-201ENSMUST00000206764 1187 ntBASIC18.63■□□□□ 0.57
Npc1l1Q6T3U4 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
Npc1l1Q6T3U4 AC160980.1-201ENSMUST00000224136 970 ntBASIC18.63■□□□□ 0.57
Npc1l1Q6T3U4 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Npc1l1Q6T3U4 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Npc1l1Q6T3U4 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Npc1l1Q6T3U4 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Npc1l1Q6T3U4 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Npc1l1Q6T3U4 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Npc1l1Q6T3U4 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Npc1l1Q6T3U4 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Npc1l1Q6T3U4 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Npc1l1Q6T3U4 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Npc1l1Q6T3U4 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Npc1l1Q6T3U4 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Npc1l1Q6T3U4 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Npc1l1Q6T3U4 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
Npc1l1Q6T3U4 Gm5253-201ENSMUST00000187104 1025 ntBASIC18.62■□□□□ 0.57
Npc1l1Q6T3U4 Gm10576-201ENSMUST00000191927 825 ntBASIC18.62■□□□□ 0.57
Npc1l1Q6T3U4 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC18.62■□□□□ 0.57
Npc1l1Q6T3U4 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC18.62■□□□□ 0.57
Npc1l1Q6T3U4 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Npc1l1Q6T3U4 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Npc1l1Q6T3U4 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Npc1l1Q6T3U4 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Npc1l1Q6T3U4 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC18.62■□□□□ 0.57
Npc1l1Q6T3U4 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Npc1l1Q6T3U4 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Npc1l1Q6T3U4 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Npc1l1Q6T3U4 AC163637.1-201ENSMUST00000215491 1894 ntBASIC18.62■□□□□ 0.57
Npc1l1Q6T3U4 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Npc1l1Q6T3U4 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Npc1l1Q6T3U4 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Npc1l1Q6T3U4 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Npc1l1Q6T3U4 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Npc1l1Q6T3U4 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Npc1l1Q6T3U4 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Npc1l1Q6T3U4 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Npc1l1Q6T3U4 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Npc1l1Q6T3U4 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
Npc1l1Q6T3U4 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC18.61■□□□□ 0.57
Npc1l1Q6T3U4 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC18.61■□□□□ 0.57
Npc1l1Q6T3U4 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC18.61■□□□□ 0.57
Npc1l1Q6T3U4 Chchd1-203ENSMUST00000224633 557 ntBASIC18.61■□□□□ 0.57
Npc1l1Q6T3U4 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Npc1l1Q6T3U4 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Npc1l1Q6T3U4 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Npc1l1Q6T3U4 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Npc1l1Q6T3U4 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Npc1l1Q6T3U4 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Npc1l1Q6T3U4 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Npc1l1Q6T3U4 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Npc1l1Q6T3U4 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC18.61■□□□□ 0.57
Npc1l1Q6T3U4 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC18.6■□□□□ 0.57
Npc1l1Q6T3U4 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Npc1l1Q6T3U4 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Npc1l1Q6T3U4 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Npc1l1Q6T3U4 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Npc1l1Q6T3U4 App-207ENSMUST00000227737 2827 ntBASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms