Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Rif1Q6PR54 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rif1Q6PR54 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.11□□□□□ -0.31
Rif1Q6PR54 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rif1Q6PR54 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Rif1Q6PR54 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rif1Q6PR54 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rif1Q6PR54 Gm28630-201ENSMUST00000187806 498 ntBASIC13.11□□□□□ -0.31
Rif1Q6PR54 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rif1Q6PR54 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Rif1Q6PR54 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.11□□□□□ -0.31
Rif1Q6PR54 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rif1Q6PR54 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rif1Q6PR54 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Rif1Q6PR54 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rif1Q6PR54 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rif1Q6PR54 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Rif1Q6PR54 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rif1Q6PR54 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rif1Q6PR54 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rif1Q6PR54 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rif1Q6PR54 AC125311.2-201ENSMUST00000227477 1940 ntBASIC13.1□□□□□ -0.31
Rif1Q6PR54 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rif1Q6PR54 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rif1Q6PR54 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rif1Q6PR54 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rif1Q6PR54 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rif1Q6PR54 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rif1Q6PR54 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rif1Q6PR54 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rif1Q6PR54 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rif1Q6PR54 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rif1Q6PR54 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Rif1Q6PR54 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
Rif1Q6PR54 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC13.1□□□□□ -0.31
Rif1Q6PR54 Gm44799-201ENSMUST00000207639 1202 ntBASIC13.1□□□□□ -0.31
Rif1Q6PR54 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Rif1Q6PR54 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rif1Q6PR54 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rif1Q6PR54 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rif1Q6PR54 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rif1Q6PR54 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rif1Q6PR54 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rif1Q6PR54 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Rif1Q6PR54 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rif1Q6PR54 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rif1Q6PR54 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rif1Q6PR54 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rif1Q6PR54 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rif1Q6PR54 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rif1Q6PR54 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rif1Q6PR54 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rif1Q6PR54 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.1□□□□□ -0.31
Rif1Q6PR54 Gm15806-201ENSMUST00000120696 955 ntBASIC13.1□□□□□ -0.31
Rif1Q6PR54 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.1□□□□□ -0.31
Rif1Q6PR54 Gm9002-201ENSMUST00000178437 499 ntBASIC13.1□□□□□ -0.31
Rif1Q6PR54 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Rif1Q6PR54 Olfr582-201ENSMUST00000098212 960 ntBASIC13.1□□□□□ -0.31
Rif1Q6PR54 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rif1Q6PR54 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Rif1Q6PR54 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rif1Q6PR54 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rif1Q6PR54 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.09□□□□□ -0.31
Rif1Q6PR54 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rif1Q6PR54 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rif1Q6PR54 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Rif1Q6PR54 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.09□□□□□ -0.31
Rif1Q6PR54 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rif1Q6PR54 Gm45203-201ENSMUST00000206384 1831 ntBASIC13.09□□□□□ -0.31
Rif1Q6PR54 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rif1Q6PR54 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rif1Q6PR54 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC13.09□□□□□ -0.31
Rif1Q6PR54 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rif1Q6PR54 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Rif1Q6PR54 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Rif1Q6PR54 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rif1Q6PR54 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rif1Q6PR54 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.09□□□□□ -0.31
Rif1Q6PR54 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.09□□□□□ -0.31
Rif1Q6PR54 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.09□□□□□ -0.31
Rif1Q6PR54 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rif1Q6PR54 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rif1Q6PR54 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rif1Q6PR54 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rif1Q6PR54 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rif1Q6PR54 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rif1Q6PR54 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Rif1Q6PR54 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
Rif1Q6PR54 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rif1Q6PR54 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.08□□□□□ -0.32
Rif1Q6PR54 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rif1Q6PR54 Gm11543-201ENSMUST00000120758 370 ntBASIC13.08□□□□□ -0.32
Rif1Q6PR54 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rif1Q6PR54 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC13.08□□□□□ -0.32
Rif1Q6PR54 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.08□□□□□ -0.32
Rif1Q6PR54 Gm37466-201ENSMUST00000195692 652 ntBASIC13.08□□□□□ -0.32
Rif1Q6PR54 Gm9682-201ENSMUST00000197505 556 ntBASIC13.08□□□□□ -0.32
Rif1Q6PR54 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rif1Q6PR54 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.08□□□□□ -0.32
Rif1Q6PR54 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms