Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Snrnp40Q6PE01 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Snrnp40Q6PE01 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Snrnp40Q6PE01 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Snrnp40Q6PE01 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Snrnp40Q6PE01 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Snrnp40Q6PE01 Gm8839-201ENSMUST00000121279 1645 ntBASIC13.68□□□□□ -0.22
Snrnp40Q6PE01 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Snrnp40Q6PE01 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Snrnp40Q6PE01 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Snrnp40Q6PE01 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Snrnp40Q6PE01 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Snrnp40Q6PE01 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Snrnp40Q6PE01 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Snrnp40Q6PE01 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Snrnp40Q6PE01 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Snrnp40Q6PE01 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Snrnp40Q6PE01 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.68□□□□□ -0.22
Snrnp40Q6PE01 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Snrnp40Q6PE01 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Snrnp40Q6PE01 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Snrnp40Q6PE01 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.68□□□□□ -0.22
Snrnp40Q6PE01 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Snrnp40Q6PE01 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.68□□□□□ -0.22
Snrnp40Q6PE01 Arhgef33-209ENSMUST00000225223 714 ntBASIC13.68□□□□□ -0.22
Snrnp40Q6PE01 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Snrnp40Q6PE01 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Snrnp40Q6PE01 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Snrnp40Q6PE01 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Snrnp40Q6PE01 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Snrnp40Q6PE01 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Snrnp40Q6PE01 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Snrnp40Q6PE01 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC13.68□□□□□ -0.22
Snrnp40Q6PE01 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Snrnp40Q6PE01 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Snrnp40Q6PE01 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Snrnp40Q6PE01 Gm43702-201ENSMUST00000198772 2546 ntBASIC13.67□□□□□ -0.22
Snrnp40Q6PE01 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Snrnp40Q6PE01 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Snrnp40Q6PE01 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Snrnp40Q6PE01 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Snrnp40Q6PE01 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Snrnp40Q6PE01 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Snrnp40Q6PE01 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
Snrnp40Q6PE01 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Snrnp40Q6PE01 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Snrnp40Q6PE01 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.67□□□□□ -0.22
Snrnp40Q6PE01 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Snrnp40Q6PE01 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC13.67□□□□□ -0.22
Snrnp40Q6PE01 Gm5745-201ENSMUST00000183748 313 ntBASIC13.67□□□□□ -0.22
Snrnp40Q6PE01 Mir6977-201ENSMUST00000184960 64 ntBASIC13.67□□□□□ -0.22
Snrnp40Q6PE01 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.67□□□□□ -0.22
Snrnp40Q6PE01 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC13.67□□□□□ -0.22
Snrnp40Q6PE01 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.67□□□□□ -0.22
Snrnp40Q6PE01 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Snrnp40Q6PE01 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Snrnp40Q6PE01 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Snrnp40Q6PE01 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC13.67□□□□□ -0.22
Snrnp40Q6PE01 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Snrnp40Q6PE01 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Snrnp40Q6PE01 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.66□□□□□ -0.22
Snrnp40Q6PE01 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Snrnp40Q6PE01 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Snrnp40Q6PE01 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Snrnp40Q6PE01 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Snrnp40Q6PE01 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Snrnp40Q6PE01 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Snrnp40Q6PE01 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Snrnp40Q6PE01 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Snrnp40Q6PE01 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC13.66□□□□□ -0.22
Snrnp40Q6PE01 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Snrnp40Q6PE01 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Snrnp40Q6PE01 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Snrnp40Q6PE01 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Snrnp40Q6PE01 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Snrnp40Q6PE01 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Snrnp40Q6PE01 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Snrnp40Q6PE01 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Snrnp40Q6PE01 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
Snrnp40Q6PE01 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.66□□□□□ -0.22
Snrnp40Q6PE01 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC13.66□□□□□ -0.22
Snrnp40Q6PE01 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Snrnp40Q6PE01 Gm12428-201ENSMUST00000119844 727 ntBASIC13.66□□□□□ -0.22
Snrnp40Q6PE01 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.66□□□□□ -0.22
Snrnp40Q6PE01 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.66□□□□□ -0.22
Snrnp40Q6PE01 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Snrnp40Q6PE01 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Snrnp40Q6PE01 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC13.66□□□□□ -0.22
Snrnp40Q6PE01 Gm2272-201ENSMUST00000194903 582 ntBASIC13.66□□□□□ -0.22
Snrnp40Q6PE01 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Snrnp40Q6PE01 AC157650.3-201ENSMUST00000225058 1476 ntBASIC13.66□□□□□ -0.22
Snrnp40Q6PE01 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Snrnp40Q6PE01 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Snrnp40Q6PE01 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
Snrnp40Q6PE01 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Snrnp40Q6PE01 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Snrnp40Q6PE01 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.65□□□□□ -0.22
Snrnp40Q6PE01 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Snrnp40Q6PE01 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.65□□□□□ -0.22
Snrnp40Q6PE01 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms