Protein–RNA interactions for Protein: Q65CL1

Ctnna3, Catenin alpha-3, mousemouse

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctnna3Q65CL1 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ctnna3Q65CL1 Ccdc166-201ENSMUST00000182172 2584 ntBASIC17.54■□□□□ 0.4
Ctnna3Q65CL1 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ctnna3Q65CL1 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ctnna3Q65CL1 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ctnna3Q65CL1 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ctnna3Q65CL1 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ctnna3Q65CL1 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ctnna3Q65CL1 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ctnna3Q65CL1 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ctnna3Q65CL1 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ctnna3Q65CL1 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ctnna3Q65CL1 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ctnna3Q65CL1 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ctnna3Q65CL1 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ctnna3Q65CL1 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.53■□□□□ 0.4
Ctnna3Q65CL1 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ctnna3Q65CL1 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ctnna3Q65CL1 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ctnna3Q65CL1 Gm2756-201ENSMUST00000195851 400 ntBASIC17.53■□□□□ 0.4
Ctnna3Q65CL1 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Ctnna3Q65CL1 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
Ctnna3Q65CL1 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC17.53■□□□□ 0.4
Ctnna3Q65CL1 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ctnna3Q65CL1 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
Ctnna3Q65CL1 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ctnna3Q65CL1 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ctnna3Q65CL1 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Ctnna3Q65CL1 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ctnna3Q65CL1 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Ctnna3Q65CL1 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Ctnna3Q65CL1 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ctnna3Q65CL1 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
Ctnna3Q65CL1 Asic1-205ENSMUST00000228185 1818 ntBASIC17.52■□□□□ 0.4
Ctnna3Q65CL1 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ctnna3Q65CL1 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ctnna3Q65CL1 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC17.52■□□□□ 0.4
Ctnna3Q65CL1 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.52■□□□□ 0.4
Ctnna3Q65CL1 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ctnna3Q65CL1 Gm27867-201ENSMUST00000184778 125 ntBASIC17.52■□□□□ 0.4
Ctnna3Q65CL1 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC17.52■□□□□ 0.4
Ctnna3Q65CL1 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC17.52■□□□□ 0.4
Ctnna3Q65CL1 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.4
Ctnna3Q65CL1 AC159093.1-201ENSMUST00000227779 380 ntBASIC17.52■□□□□ 0.4
Ctnna3Q65CL1 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ctnna3Q65CL1 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Ctnna3Q65CL1 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ctnna3Q65CL1 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.52■□□□□ 0.4
Ctnna3Q65CL1 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ctnna3Q65CL1 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ctnna3Q65CL1 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.52■□□□□ 0.39
Ctnna3Q65CL1 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Ctnna3Q65CL1 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
Ctnna3Q65CL1 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ctnna3Q65CL1 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Ctnna3Q65CL1 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ctnna3Q65CL1 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ctnna3Q65CL1 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Ctnna3Q65CL1 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC17.51■□□□□ 0.39
Ctnna3Q65CL1 Gm27702-201ENSMUST00000184512 56 ntBASIC17.51■□□□□ 0.39
Ctnna3Q65CL1 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC17.51■□□□□ 0.39
Ctnna3Q65CL1 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ctnna3Q65CL1 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ctnna3Q65CL1 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ctnna3Q65CL1 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ctnna3Q65CL1 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ctnna3Q65CL1 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Ctnna3Q65CL1 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC17.51■□□□□ 0.39
Ctnna3Q65CL1 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ctnna3Q65CL1 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ctnna3Q65CL1 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ctnna3Q65CL1 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ctnna3Q65CL1 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.51■□□□□ 0.39
Ctnna3Q65CL1 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ctnna3Q65CL1 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.5■□□□□ 0.39
Ctnna3Q65CL1 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ctnna3Q65CL1 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Ctnna3Q65CL1 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ctnna3Q65CL1 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC17.5■□□□□ 0.39
Ctnna3Q65CL1 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.5■□□□□ 0.39
Ctnna3Q65CL1 Gm15467-201ENSMUST00000120582 445 ntBASIC17.5■□□□□ 0.39
Ctnna3Q65CL1 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.5■□□□□ 0.39
Ctnna3Q65CL1 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC17.5■□□□□ 0.39
Ctnna3Q65CL1 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC17.5■□□□□ 0.39
Ctnna3Q65CL1 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ctnna3Q65CL1 Mir5126-201ENSMUST00000175513 77 ntBASIC17.5■□□□□ 0.39
Ctnna3Q65CL1 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Ctnna3Q65CL1 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ctnna3Q65CL1 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ctnna3Q65CL1 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ctnna3Q65CL1 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ctnna3Q65CL1 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ctnna3Q65CL1 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ctnna3Q65CL1 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ctnna3Q65CL1 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC17.5■□□□□ 0.39
Ctnna3Q65CL1 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ctnna3Q65CL1 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ctnna3Q65CL1 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ctnna3Q65CL1 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ctnna3Q65CL1 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms