Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Gm18187-201ENSMUST00000196476 984 ntBASIC18.67■□□□□ 0.58
Col11a2Q64739 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Col11a2Q64739 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Col11a2Q64739 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Col11a2Q64739 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col11a2Q64739 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.67■□□□□ 0.58
Col11a2Q64739 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Col11a2Q64739 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col11a2Q64739 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col11a2Q64739 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.66■□□□□ 0.58
Col11a2Q64739 Gm4875-201ENSMUST00000118257 786 ntBASIC18.66■□□□□ 0.58
Col11a2Q64739 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC18.66■□□□□ 0.58
Col11a2Q64739 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Col11a2Q64739 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col11a2Q64739 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col11a2Q64739 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Col11a2Q64739 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Col11a2Q64739 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col11a2Q64739 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col11a2Q64739 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC18.66■□□□□ 0.58
Col11a2Q64739 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC18.66■□□□□ 0.58
Col11a2Q64739 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Col11a2Q64739 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col11a2Q64739 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col11a2Q64739 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Col11a2Q64739 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col11a2Q64739 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col11a2Q64739 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col11a2Q64739 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Col11a2Q64739 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col11a2Q64739 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC18.65■□□□□ 0.58
Col11a2Q64739 Gm23984-201ENSMUST00000157139 203 ntBASIC18.65■□□□□ 0.58
Col11a2Q64739 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col11a2Q64739 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col11a2Q64739 Dupd1-202ENSMUST00000224735 548 ntBASIC18.65■□□□□ 0.58
Col11a2Q64739 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col11a2Q64739 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Col11a2Q64739 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col11a2Q64739 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col11a2Q64739 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Col11a2Q64739 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
Col11a2Q64739 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col11a2Q64739 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Col11a2Q64739 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Col11a2Q64739 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Col11a2Q64739 Gm42466-201ENSMUST00000202099 1301 ntBASIC18.64■□□□□ 0.57
Col11a2Q64739 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Col11a2Q64739 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC18.64■□□□□ 0.57
Col11a2Q64739 Gm6539-201ENSMUST00000119157 1064 ntBASIC18.64■□□□□ 0.57
Col11a2Q64739 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Col11a2Q64739 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
Col11a2Q64739 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
Col11a2Q64739 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
Col11a2Q64739 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC18.64■□□□□ 0.57
Col11a2Q64739 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC18.64■□□□□ 0.57
Col11a2Q64739 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col11a2Q64739 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Col11a2Q64739 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC18.64■□□□□ 0.57
Col11a2Q64739 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC18.64■□□□□ 0.57
Col11a2Q64739 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Col11a2Q64739 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Col11a2Q64739 Gm6180-201ENSMUST00000065243 498 ntBASIC18.64■□□□□ 0.57
Col11a2Q64739 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col11a2Q64739 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col11a2Q64739 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Col11a2Q64739 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Col11a2Q64739 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Col11a2Q64739 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col11a2Q64739 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC18.63■□□□□ 0.57
Col11a2Q64739 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC18.63■□□□□ 0.57
Col11a2Q64739 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col11a2Q64739 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC18.63■□□□□ 0.57
Col11a2Q64739 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col11a2Q64739 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Col11a2Q64739 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col11a2Q64739 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Col11a2Q64739 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col11a2Q64739 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Col11a2Q64739 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Col11a2Q64739 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC18.63■□□□□ 0.57
Col11a2Q64739 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col11a2Q64739 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC18.63■□□□□ 0.57
Col11a2Q64739 Gm6745-201ENSMUST00000199216 526 ntBASIC18.63■□□□□ 0.57
Col11a2Q64739 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC18.63■□□□□ 0.57
Col11a2Q64739 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col11a2Q64739 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Col11a2Q64739 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col11a2Q64739 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Col11a2Q64739 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Col11a2Q64739 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col11a2Q64739 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Col11a2Q64739 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col11a2Q64739 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col11a2Q64739 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col11a2Q64739 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col11a2Q64739 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC18.62■□□□□ 0.57
Col11a2Q64739 AC158529.1-201ENSMUST00000223618 239 ntBASIC18.62■□□□□ 0.57
Col11a2Q64739 AC154239.3-201ENSMUST00000226933 674 ntBASIC18.62■□□□□ 0.57
Col11a2Q64739 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Col11a2Q64739 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms