Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC19.7■□□□□ 0.74
Clcn1Q64347 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clcn1Q64347 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clcn1Q64347 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clcn1Q64347 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clcn1Q64347 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Clcn1Q64347 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Clcn1Q64347 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clcn1Q64347 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clcn1Q64347 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clcn1Q64347 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clcn1Q64347 Gm14057-201ENSMUST00000120631 482 ntBASIC19.69■□□□□ 0.74
Clcn1Q64347 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC19.69■□□□□ 0.74
Clcn1Q64347 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Clcn1Q64347 Gm27494-201ENSMUST00000184735 189 ntBASIC19.69■□□□□ 0.74
Clcn1Q64347 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clcn1Q64347 Gm44335-201ENSMUST00000196879 141 ntBASIC19.69■□□□□ 0.74
Clcn1Q64347 Gm44297-201ENSMUST00000198304 141 ntBASIC19.69■□□□□ 0.74
Clcn1Q64347 Gm44346-201ENSMUST00000198851 141 ntBASIC19.69■□□□□ 0.74
Clcn1Q64347 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC19.69■□□□□ 0.74
Clcn1Q64347 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Clcn1Q64347 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clcn1Q64347 Gm9954-202ENSMUST00000198686 4725 ntBASIC19.69■□□□□ 0.74
Clcn1Q64347 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clcn1Q64347 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clcn1Q64347 Gm13332-201ENSMUST00000120451 1398 ntBASIC19.69■□□□□ 0.74
Clcn1Q64347 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clcn1Q64347 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clcn1Q64347 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Clcn1Q64347 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clcn1Q64347 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clcn1Q64347 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clcn1Q64347 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clcn1Q64347 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clcn1Q64347 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Clcn1Q64347 Gm13616-201ENSMUST00000120600 222 ntBASIC19.68■□□□□ 0.74
Clcn1Q64347 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC19.68■□□□□ 0.74
Clcn1Q64347 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clcn1Q64347 Gm6257-201ENSMUST00000163864 910 ntBASIC19.68■□□□□ 0.74
Clcn1Q64347 Gm20553-201ENSMUST00000204205 844 ntBASIC19.68■□□□□ 0.74
Clcn1Q64347 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clcn1Q64347 AC159114.1-201ENSMUST00000220349 266 ntBASIC19.68■□□□□ 0.74
Clcn1Q64347 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clcn1Q64347 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clcn1Q64347 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Clcn1Q64347 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clcn1Q64347 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clcn1Q64347 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Clcn1Q64347 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clcn1Q64347 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clcn1Q64347 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Clcn1Q64347 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clcn1Q64347 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clcn1Q64347 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clcn1Q64347 Gm6226-201ENSMUST00000117765 1146 ntBASIC19.67■□□□□ 0.74
Clcn1Q64347 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
Clcn1Q64347 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Clcn1Q64347 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clcn1Q64347 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Clcn1Q64347 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clcn1Q64347 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clcn1Q64347 Gm5366-201ENSMUST00000215494 1338 ntBASIC19.67■□□□□ 0.74
Clcn1Q64347 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Clcn1Q64347 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clcn1Q64347 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clcn1Q64347 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Clcn1Q64347 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clcn1Q64347 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clcn1Q64347 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clcn1Q64347 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clcn1Q64347 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Clcn1Q64347 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC19.66■□□□□ 0.74
Clcn1Q64347 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clcn1Q64347 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clcn1Q64347 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clcn1Q64347 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clcn1Q64347 Gm11025-201ENSMUST00000140773 466 ntBASIC19.66■□□□□ 0.74
Clcn1Q64347 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC19.66■□□□□ 0.74
Clcn1Q64347 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Clcn1Q64347 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Clcn1Q64347 Mir7036b-201ENSMUST00000184791 63 ntBASIC19.66■□□□□ 0.74
Clcn1Q64347 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Clcn1Q64347 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Clcn1Q64347 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Clcn1Q64347 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Clcn1Q64347 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC19.66■□□□□ 0.74
Clcn1Q64347 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clcn1Q64347 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clcn1Q64347 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Clcn1Q64347 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Clcn1Q64347 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Clcn1Q64347 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clcn1Q64347 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Clcn1Q64347 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC19.65■□□□□ 0.74
Clcn1Q64347 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clcn1Q64347 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clcn1Q64347 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC19.65■□□□□ 0.74
Clcn1Q64347 Gm15427-201ENSMUST00000117288 531 ntBASIC19.65■□□□□ 0.74
Clcn1Q64347 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC19.65■□□□□ 0.74
Clcn1Q64347 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms