Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Col7a1Q63870 Gm15782-201ENSMUST00000121073 445 ntBASIC12.75□□□□□ -0.37
Col7a1Q63870 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.75□□□□□ -0.37
Col7a1Q63870 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.75□□□□□ -0.37
Col7a1Q63870 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.75□□□□□ -0.37
Col7a1Q63870 AC107711.5-202ENSMUST00000226429 702 ntBASIC12.75□□□□□ -0.37
Col7a1Q63870 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Col7a1Q63870 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col7a1Q63870 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col7a1Q63870 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Col7a1Q63870 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col7a1Q63870 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.75□□□□□ -0.37
Col7a1Q63870 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC12.75□□□□□ -0.37
Col7a1Q63870 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col7a1Q63870 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC12.75□□□□□ -0.37
Col7a1Q63870 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Col7a1Q63870 Gm9522-201ENSMUST00000182394 926 ntBASIC12.75□□□□□ -0.37
Col7a1Q63870 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col7a1Q63870 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col7a1Q63870 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col7a1Q63870 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col7a1Q63870 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col7a1Q63870 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Col7a1Q63870 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC12.74□□□□□ -0.37
Col7a1Q63870 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Col7a1Q63870 Iqck-206ENSMUST00000208658 2891 ntBASIC12.74□□□□□ -0.37
Col7a1Q63870 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col7a1Q63870 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Col7a1Q63870 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col7a1Q63870 Gm27701-201ENSMUST00000184498 110 ntBASIC12.74□□□□□ -0.37
Col7a1Q63870 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.74□□□□□ -0.37
Col7a1Q63870 Gm10766-202ENSMUST00000194123 606 ntBASIC12.74□□□□□ -0.37
Col7a1Q63870 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC12.74□□□□□ -0.37
Col7a1Q63870 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
Col7a1Q63870 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col7a1Q63870 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col7a1Q63870 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC12.74□□□□□ -0.37
Col7a1Q63870 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC12.74□□□□□ -0.37
Col7a1Q63870 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col7a1Q63870 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col7a1Q63870 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.74□□□□□ -0.37
Col7a1Q63870 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col7a1Q63870 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC12.74□□□□□ -0.37
Col7a1Q63870 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col7a1Q63870 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col7a1Q63870 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Col7a1Q63870 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col7a1Q63870 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col7a1Q63870 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col7a1Q63870 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.73□□□□□ -0.37
Col7a1Q63870 Mir1897-201ENSMUST00000122581 272 ntBASIC12.73□□□□□ -0.37
Col7a1Q63870 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Col7a1Q63870 Mir6392-201ENSMUST00000184924 108 ntBASIC12.73□□□□□ -0.37
Col7a1Q63870 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.73□□□□□ -0.37
Col7a1Q63870 Gm43068-201ENSMUST00000201095 1273 ntBASIC12.73□□□□□ -0.37
Col7a1Q63870 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.73□□□□□ -0.37
Col7a1Q63870 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col7a1Q63870 AC158529.1-201ENSMUST00000223618 239 ntBASIC12.73□□□□□ -0.37
Col7a1Q63870 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.73□□□□□ -0.37
Col7a1Q63870 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col7a1Q63870 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col7a1Q63870 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col7a1Q63870 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col7a1Q63870 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col7a1Q63870 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col7a1Q63870 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col7a1Q63870 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Col7a1Q63870 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col7a1Q63870 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col7a1Q63870 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Col7a1Q63870 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC12.73□□□□□ -0.37
Col7a1Q63870 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.73□□□□□ -0.37
Col7a1Q63870 Gm28760-201ENSMUST00000185995 736 ntBASIC12.73□□□□□ -0.37
Col7a1Q63870 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col7a1Q63870 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col7a1Q63870 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col7a1Q63870 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col7a1Q63870 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col7a1Q63870 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col7a1Q63870 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col7a1Q63870 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col7a1Q63870 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col7a1Q63870 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.72□□□□□ -0.37
Col7a1Q63870 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.72□□□□□ -0.37
Col7a1Q63870 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col7a1Q63870 Gm9797-201ENSMUST00000052902 613 ntBASIC12.72□□□□□ -0.37
Col7a1Q63870 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col7a1Q63870 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Col7a1Q63870 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC12.72□□□□□ -0.37
Col7a1Q63870 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col7a1Q63870 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC12.72□□□□□ -0.37
Col7a1Q63870 Gm12390-201ENSMUST00000117897 397 ntBASIC12.72□□□□□ -0.37
Col7a1Q63870 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC12.72□□□□□ -0.37
Col7a1Q63870 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.72□□□□□ -0.37
Col7a1Q63870 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Col7a1Q63870 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col7a1Q63870 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC12.72□□□□□ -0.37
Col7a1Q63870 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col7a1Q63870 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col7a1Q63870 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms