Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn9aQ62205 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn9aQ62205 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn9aQ62205 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn9aQ62205 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn9aQ62205 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn9aQ62205 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn9aQ62205 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC18.19■□□□□ 0.5
Scn9aQ62205 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Scn9aQ62205 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Scn9aQ62205 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn9aQ62205 AC124732.1-201ENSMUST00000221551 910 ntBASIC18.19■□□□□ 0.5
Scn9aQ62205 Gm9063-201ENSMUST00000223299 582 ntBASIC18.19■□□□□ 0.5
Scn9aQ62205 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Scn9aQ62205 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn9aQ62205 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn9aQ62205 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC18.18■□□□□ 0.5
Scn9aQ62205 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC18.18■□□□□ 0.5
Scn9aQ62205 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn9aQ62205 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Scn9aQ62205 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn9aQ62205 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
Scn9aQ62205 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC18.18■□□□□ 0.5
Scn9aQ62205 Gm7775-201ENSMUST00000218871 853 ntBASIC18.18■□□□□ 0.5
Scn9aQ62205 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn9aQ62205 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn9aQ62205 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn9aQ62205 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn9aQ62205 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn9aQ62205 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn9aQ62205 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn9aQ62205 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn9aQ62205 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn9aQ62205 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC18.17■□□□□ 0.5
Scn9aQ62205 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn9aQ62205 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC18.17■□□□□ 0.5
Scn9aQ62205 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Scn9aQ62205 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Scn9aQ62205 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn9aQ62205 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn9aQ62205 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn9aQ62205 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn9aQ62205 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Scn9aQ62205 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn9aQ62205 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Scn9aQ62205 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn9aQ62205 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Scn9aQ62205 AC132467.2-202ENSMUST00000227726 559 ntBASIC18.17■□□□□ 0.5
Scn9aQ62205 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn9aQ62205 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scn9aQ62205 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scn9aQ62205 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scn9aQ62205 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC18.16■□□□□ 0.5
Scn9aQ62205 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scn9aQ62205 AC124751.1-201ENSMUST00000222716 1408 ntBASIC18.16■□□□□ 0.5
Scn9aQ62205 Gm14767-201ENSMUST00000121559 586 ntBASIC18.16■□□□□ 0.5
Scn9aQ62205 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scn9aQ62205 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scn9aQ62205 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scn9aQ62205 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC18.16■□□□□ 0.5
Scn9aQ62205 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Scn9aQ62205 Cdk7-205ENSMUST00000225990 1159 ntBASIC18.16■□□□□ 0.5
Scn9aQ62205 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scn9aQ62205 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scn9aQ62205 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Scn9aQ62205 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Scn9aQ62205 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scn9aQ62205 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Scn9aQ62205 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Scn9aQ62205 Gm45293-201ENSMUST00000209754 1812 ntBASIC18.16■□□□□ 0.5
Scn9aQ62205 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scn9aQ62205 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Scn9aQ62205 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn9aQ62205 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn9aQ62205 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Scn9aQ62205 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
Scn9aQ62205 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Scn9aQ62205 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn9aQ62205 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn9aQ62205 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn9aQ62205 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn9aQ62205 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn9aQ62205 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn9aQ62205 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn9aQ62205 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn9aQ62205 Gm6912-201ENSMUST00000117218 544 ntBASIC18.15■□□□□ 0.5
Scn9aQ62205 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Scn9aQ62205 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Scn9aQ62205 Gm18187-201ENSMUST00000196476 984 ntBASIC18.15■□□□□ 0.5
Scn9aQ62205 Gm43433-201ENSMUST00000196573 481 ntBASIC18.15■□□□□ 0.5
Scn9aQ62205 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC18.15■□□□□ 0.5
Scn9aQ62205 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Scn9aQ62205 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn9aQ62205 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn9aQ62205 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
Scn9aQ62205 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Scn9aQ62205 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scn9aQ62205 Gm3365-201ENSMUST00000216296 1480 ntBASIC18.14■□□□□ 0.49
Scn9aQ62205 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scn9aQ62205 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms