Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC18.37■□□□□ 0.53
Ctr9Q62018 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ctr9Q62018 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ctr9Q62018 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ctr9Q62018 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC18.37■□□□□ 0.53
Ctr9Q62018 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ctr9Q62018 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ctr9Q62018 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ctr9Q62018 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC18.37■□□□□ 0.53
Ctr9Q62018 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ctr9Q62018 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ctr9Q62018 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC18.36■□□□□ 0.53
Ctr9Q62018 Gm11185-201ENSMUST00000117732 1007 ntBASIC18.36■□□□□ 0.53
Ctr9Q62018 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC18.36■□□□□ 0.53
Ctr9Q62018 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ctr9Q62018 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC18.36■□□□□ 0.53
Ctr9Q62018 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Ctr9Q62018 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ctr9Q62018 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ctr9Q62018 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC18.36■□□□□ 0.53
Ctr9Q62018 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC18.36■□□□□ 0.53
Ctr9Q62018 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC18.36■□□□□ 0.53
Ctr9Q62018 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ctr9Q62018 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC18.36■□□□□ 0.53
Ctr9Q62018 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ctr9Q62018 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ctr9Q62018 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ctr9Q62018 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ctr9Q62018 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ctr9Q62018 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Ctr9Q62018 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ctr9Q62018 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ctr9Q62018 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ctr9Q62018 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ctr9Q62018 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ctr9Q62018 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ctr9Q62018 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ctr9Q62018 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Ctr9Q62018 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ctr9Q62018 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ctr9Q62018 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ctr9Q62018 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ctr9Q62018 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ctr9Q62018 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ctr9Q62018 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Ctr9Q62018 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC18.35■□□□□ 0.53
Ctr9Q62018 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ctr9Q62018 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ctr9Q62018 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC18.35■□□□□ 0.53
Ctr9Q62018 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ctr9Q62018 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC18.35■□□□□ 0.53
Ctr9Q62018 Gm37153-201ENSMUST00000193637 231 ntBASIC18.35■□□□□ 0.53
Ctr9Q62018 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC18.35■□□□□ 0.53
Ctr9Q62018 Gm43935-201ENSMUST00000203569 1050 ntBASIC18.35■□□□□ 0.53
Ctr9Q62018 Gm45167-201ENSMUST00000208007 322 ntBASIC18.35■□□□□ 0.53
Ctr9Q62018 AC158538.2-201ENSMUST00000225455 906 ntBASIC18.35■□□□□ 0.53
Ctr9Q62018 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Ctr9Q62018 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ctr9Q62018 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ctr9Q62018 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ctr9Q62018 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC18.35■□□□□ 0.53
Ctr9Q62018 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ctr9Q62018 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ctr9Q62018 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Ctr9Q62018 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ctr9Q62018 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ctr9Q62018 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ctr9Q62018 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ctr9Q62018 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ctr9Q62018 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ctr9Q62018 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ctr9Q62018 Gm19430-201ENSMUST00000193847 2137 ntBASIC18.34■□□□□ 0.53
Ctr9Q62018 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ctr9Q62018 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Ctr9Q62018 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ctr9Q62018 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ctr9Q62018 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ctr9Q62018 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Ctr9Q62018 Gm11779-201ENSMUST00000118541 368 ntBASIC18.34■□□□□ 0.53
Ctr9Q62018 Gm14140-201ENSMUST00000119999 995 ntBASIC18.34■□□□□ 0.53
Ctr9Q62018 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ctr9Q62018 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC18.34■□□□□ 0.53
Ctr9Q62018 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ctr9Q62018 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ctr9Q62018 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Ctr9Q62018 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ctr9Q62018 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ctr9Q62018 AC122901.1-201ENSMUST00000214203 1790 ntBASIC18.34■□□□□ 0.53
Ctr9Q62018 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ctr9Q62018 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Ctr9Q62018 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ctr9Q62018 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ctr9Q62018 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ctr9Q62018 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ctr9Q62018 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ctr9Q62018 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ctr9Q62018 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC18.33■□□□□ 0.53
Ctr9Q62018 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ctr9Q62018 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ctr9Q62018 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms