Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mre11Q61216 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mre11Q61216 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Mre11Q61216 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mre11Q61216 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.72■□□□□ 0.59
Mre11Q61216 Gm20049-201ENSMUST00000219950 730 ntBASIC18.72■□□□□ 0.59
Mre11Q61216 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mre11Q61216 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mre11Q61216 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mre11Q61216 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Mre11Q61216 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Mre11Q61216 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mre11Q61216 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Mre11Q61216 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mre11Q61216 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Mre11Q61216 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mre11Q61216 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Mre11Q61216 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mre11Q61216 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mre11Q61216 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mre11Q61216 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mre11Q61216 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Mre11Q61216 Gm6858-201ENSMUST00000208582 1468 ntBASIC18.71■□□□□ 0.59
Mre11Q61216 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Mre11Q61216 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Mre11Q61216 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Mre11Q61216 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Mre11Q61216 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Mre11Q61216 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Mre11Q61216 AC132265.1-201ENSMUST00000219233 1665 ntBASIC18.71■□□□□ 0.59
Mre11Q61216 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
Mre11Q61216 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Mre11Q61216 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Mre11Q61216 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Mre11Q61216 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Mre11Q61216 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Mre11Q61216 Gm43509-201ENSMUST00000196551 2594 ntBASIC18.71■□□□□ 0.59
Mre11Q61216 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Mre11Q61216 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Mre11Q61216 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC18.7■□□□□ 0.58
Mre11Q61216 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Mre11Q61216 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Mre11Q61216 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mre11Q61216 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Mre11Q61216 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mre11Q61216 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mre11Q61216 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Mre11Q61216 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mre11Q61216 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mre11Q61216 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mre11Q61216 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mre11Q61216 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Mre11Q61216 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mre11Q61216 Gm10653-202ENSMUST00000139570 835 ntBASIC18.7■□□□□ 0.58
Mre11Q61216 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mre11Q61216 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.7■□□□□ 0.58
Mre11Q61216 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.7■□□□□ 0.58
Mre11Q61216 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
Mre11Q61216 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC18.7■□□□□ 0.58
Mre11Q61216 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Mre11Q61216 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Mre11Q61216 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mre11Q61216 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC18.7■□□□□ 0.58
Mre11Q61216 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mre11Q61216 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Mre11Q61216 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mre11Q61216 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mre11Q61216 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mre11Q61216 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC18.7■□□□□ 0.58
Mre11Q61216 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mre11Q61216 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Mre11Q61216 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Mre11Q61216 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Mre11Q61216 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Mre11Q61216 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Mre11Q61216 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Mre11Q61216 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Mre11Q61216 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Mre11Q61216 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Mre11Q61216 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Mre11Q61216 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Mre11Q61216 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Mre11Q61216 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Mre11Q61216 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Mre11Q61216 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Mre11Q61216 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Mre11Q61216 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Mre11Q61216 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Mre11Q61216 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Mre11Q61216 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Mre11Q61216 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.69■□□□□ 0.58
Mre11Q61216 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Mre11Q61216 Gm37019-201ENSMUST00000192133 2134 ntBASIC18.69■□□□□ 0.58
Mre11Q61216 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Mre11Q61216 Gm15823-201ENSMUST00000064305 670 ntBASIC18.69■□□□□ 0.58
Mre11Q61216 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Mre11Q61216 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Mre11Q61216 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Mre11Q61216 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Mre11Q61216 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms