Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
ClpbQ60649 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ClpbQ60649 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ClpbQ60649 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ClpbQ60649 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
ClpbQ60649 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.97□□□□□ -0.01
ClpbQ60649 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ClpbQ60649 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ClpbQ60649 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ClpbQ60649 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
ClpbQ60649 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.97□□□□□ -0.01
ClpbQ60649 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ClpbQ60649 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ClpbQ60649 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ClpbQ60649 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ClpbQ60649 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ClpbQ60649 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ClpbQ60649 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
ClpbQ60649 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ClpbQ60649 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ClpbQ60649 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ClpbQ60649 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ClpbQ60649 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ClpbQ60649 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
ClpbQ60649 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
ClpbQ60649 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
ClpbQ60649 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.96□□□□□ -0.01
ClpbQ60649 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ClpbQ60649 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ClpbQ60649 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.96□□□□□ -0.01
ClpbQ60649 Mzt1-203ENSMUST00000227948 952 ntBASIC14.96□□□□□ -0.01
ClpbQ60649 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
ClpbQ60649 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.96□□□□□ -0.01
ClpbQ60649 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ClpbQ60649 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
ClpbQ60649 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
ClpbQ60649 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
ClpbQ60649 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
ClpbQ60649 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ClpbQ60649 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ClpbQ60649 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
ClpbQ60649 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.96□□□□□ -0.02
ClpbQ60649 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
ClpbQ60649 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
ClpbQ60649 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ClpbQ60649 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ClpbQ60649 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ClpbQ60649 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
ClpbQ60649 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ClpbQ60649 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ClpbQ60649 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
ClpbQ60649 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.95□□□□□ -0.02
ClpbQ60649 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
ClpbQ60649 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ClpbQ60649 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
ClpbQ60649 Gm13884-201ENSMUST00000118103 829 ntBASIC14.95□□□□□ -0.02
ClpbQ60649 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.95□□□□□ -0.02
ClpbQ60649 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC14.95□□□□□ -0.02
ClpbQ60649 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
ClpbQ60649 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
ClpbQ60649 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.95□□□□□ -0.02
ClpbQ60649 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.95□□□□□ -0.02
ClpbQ60649 Rps4l-201ENSMUST00000071745 943 ntBASIC14.95□□□□□ -0.02
ClpbQ60649 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
ClpbQ60649 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
ClpbQ60649 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ClpbQ60649 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
ClpbQ60649 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ClpbQ60649 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.95□□□□□ -0.02
ClpbQ60649 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ClpbQ60649 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.95□□□□□ -0.02
ClpbQ60649 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
ClpbQ60649 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ClpbQ60649 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ClpbQ60649 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ClpbQ60649 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ClpbQ60649 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
ClpbQ60649 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ClpbQ60649 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.94□□□□□ -0.02
ClpbQ60649 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ClpbQ60649 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
ClpbQ60649 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ClpbQ60649 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
ClpbQ60649 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
ClpbQ60649 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
ClpbQ60649 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ClpbQ60649 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ClpbQ60649 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC14.94□□□□□ -0.02
ClpbQ60649 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.94□□□□□ -0.02
ClpbQ60649 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
ClpbQ60649 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ClpbQ60649 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ClpbQ60649 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
ClpbQ60649 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ClpbQ60649 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
ClpbQ60649 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ClpbQ60649 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
ClpbQ60649 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ClpbQ60649 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
ClpbQ60649 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms