Protein–RNA interactions for Protein: Q5XFR0

Pabpn1l, Embryonic polyadenylate-binding protein 2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1lQ5XFR0 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pabpn1lQ5XFR0 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Pabpn1lQ5XFR0 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pabpn1lQ5XFR0 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pabpn1lQ5XFR0 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pabpn1lQ5XFR0 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pabpn1lQ5XFR0 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pabpn1lQ5XFR0 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pabpn1lQ5XFR0 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pabpn1lQ5XFR0 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pabpn1lQ5XFR0 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Pabpn1lQ5XFR0 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pabpn1lQ5XFR0 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pabpn1lQ5XFR0 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pabpn1lQ5XFR0 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pabpn1lQ5XFR0 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pabpn1lQ5XFR0 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pabpn1lQ5XFR0 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pabpn1lQ5XFR0 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pabpn1lQ5XFR0 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pabpn1lQ5XFR0 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pabpn1lQ5XFR0 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Pabpn1lQ5XFR0 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Pabpn1lQ5XFR0 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pabpn1lQ5XFR0 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pabpn1lQ5XFR0 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pabpn1lQ5XFR0 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC15.66■□□□□ 0.1
Pabpn1lQ5XFR0 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Pabpn1lQ5XFR0 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pabpn1lQ5XFR0 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC15.66■□□□□ 0.1
Pabpn1lQ5XFR0 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pabpn1lQ5XFR0 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pabpn1lQ5XFR0 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pabpn1lQ5XFR0 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC15.66■□□□□ 0.1
Pabpn1lQ5XFR0 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC15.66■□□□□ 0.1
Pabpn1lQ5XFR0 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC15.66■□□□□ 0.1
Pabpn1lQ5XFR0 Gm37292-201ENSMUST00000192062 758 ntBASIC15.66■□□□□ 0.1
Pabpn1lQ5XFR0 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC15.66■□□□□ 0.1
Pabpn1lQ5XFR0 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Pabpn1lQ5XFR0 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pabpn1lQ5XFR0 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pabpn1lQ5XFR0 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.66■□□□□ 0.1
Pabpn1lQ5XFR0 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pabpn1lQ5XFR0 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pabpn1lQ5XFR0 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pabpn1lQ5XFR0 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pabpn1lQ5XFR0 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pabpn1lQ5XFR0 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Pabpn1lQ5XFR0 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Pabpn1lQ5XFR0 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Pabpn1lQ5XFR0 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pabpn1lQ5XFR0 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.65■□□□□ 0.1
Pabpn1lQ5XFR0 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pabpn1lQ5XFR0 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pabpn1lQ5XFR0 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pabpn1lQ5XFR0 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pabpn1lQ5XFR0 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pabpn1lQ5XFR0 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC15.65■□□□□ 0.1
Pabpn1lQ5XFR0 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pabpn1lQ5XFR0 Mir1199-201ENSMUST00000117015 119 ntBASIC15.65■□□□□ 0.1
Pabpn1lQ5XFR0 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pabpn1lQ5XFR0 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Pabpn1lQ5XFR0 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC15.65■□□□□ 0.1
Pabpn1lQ5XFR0 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pabpn1lQ5XFR0 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pabpn1lQ5XFR0 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Pabpn1lQ5XFR0 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pabpn1lQ5XFR0 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pabpn1lQ5XFR0 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pabpn1lQ5XFR0 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
Pabpn1lQ5XFR0 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pabpn1lQ5XFR0 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pabpn1lQ5XFR0 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pabpn1lQ5XFR0 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
Pabpn1lQ5XFR0 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC15.65■□□□□ 0.1
Pabpn1lQ5XFR0 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pabpn1lQ5XFR0 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pabpn1lQ5XFR0 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pabpn1lQ5XFR0 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pabpn1lQ5XFR0 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pabpn1lQ5XFR0 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.64■□□□□ 0.09
Pabpn1lQ5XFR0 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pabpn1lQ5XFR0 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pabpn1lQ5XFR0 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pabpn1lQ5XFR0 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC15.64■□□□□ 0.09
Pabpn1lQ5XFR0 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Pabpn1lQ5XFR0 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC15.64■□□□□ 0.09
Pabpn1lQ5XFR0 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC15.64■□□□□ 0.09
Pabpn1lQ5XFR0 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pabpn1lQ5XFR0 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pabpn1lQ5XFR0 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
Pabpn1lQ5XFR0 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Pabpn1lQ5XFR0 AC120002.2-201ENSMUST00000220205 773 ntBASIC15.64■□□□□ 0.09
Pabpn1lQ5XFR0 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pabpn1lQ5XFR0 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Pabpn1lQ5XFR0 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pabpn1lQ5XFR0 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pabpn1lQ5XFR0 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pabpn1lQ5XFR0 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pabpn1lQ5XFR0 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms