Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-1Q5R1I8 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-1Q5R1I8 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-1Q5R1I8 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Trav3-1Q5R1I8 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-1Q5R1I8 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-1Q5R1I8 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-1Q5R1I8 AC117194.1-201ENSMUST00000224847 3002 ntBASIC10.56□□□□□ -0.72
Trav3-1Q5R1I8 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-1Q5R1I8 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-1Q5R1I8 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-1Q5R1I8 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC10.56□□□□□ -0.72
Trav3-1Q5R1I8 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-1Q5R1I8 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-1Q5R1I8 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-1Q5R1I8 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-1Q5R1I8 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Trav3-1Q5R1I8 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC10.56□□□□□ -0.72
Trav3-1Q5R1I8 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-1Q5R1I8 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-1Q5R1I8 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC10.56□□□□□ -0.72
Trav3-1Q5R1I8 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-1Q5R1I8 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-1Q5R1I8 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC10.56□□□□□ -0.72
Trav3-1Q5R1I8 AC107711.5-202ENSMUST00000226429 702 ntBASIC10.56□□□□□ -0.72
Trav3-1Q5R1I8 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-1Q5R1I8 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-1Q5R1I8 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-1Q5R1I8 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-1Q5R1I8 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-1Q5R1I8 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-1Q5R1I8 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-1Q5R1I8 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-1Q5R1I8 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-1Q5R1I8 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Trav3-1Q5R1I8 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Trav3-1Q5R1I8 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-1Q5R1I8 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-1Q5R1I8 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-1Q5R1I8 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Trav3-1Q5R1I8 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-1Q5R1I8 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Trav3-1Q5R1I8 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-1Q5R1I8 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-1Q5R1I8 Gm10305-201ENSMUST00000195331 2475 ntBASIC10.56□□□□□ -0.72
Trav3-1Q5R1I8 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-1Q5R1I8 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-1Q5R1I8 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-1Q5R1I8 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-1Q5R1I8 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-1Q5R1I8 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-1Q5R1I8 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-1Q5R1I8 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Trav3-1Q5R1I8 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-1Q5R1I8 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC10.55□□□□□ -0.72
Trav3-1Q5R1I8 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-1Q5R1I8 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-1Q5R1I8 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Trav3-1Q5R1I8 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Trav3-1Q5R1I8 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-1Q5R1I8 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Trav3-1Q5R1I8 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-1Q5R1I8 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-1Q5R1I8 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-1Q5R1I8 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Trav3-1Q5R1I8 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC10.55□□□□□ -0.72
Trav3-1Q5R1I8 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-1Q5R1I8 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-1Q5R1I8 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-1Q5R1I8 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC10.55□□□□□ -0.72
Trav3-1Q5R1I8 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-1Q5R1I8 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
Trav3-1Q5R1I8 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-1Q5R1I8 AC166574.6-201ENSMUST00000227889 1806 ntBASIC10.55□□□□□ -0.72
Trav3-1Q5R1I8 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-1Q5R1I8 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-1Q5R1I8 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-1Q5R1I8 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-1Q5R1I8 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-1Q5R1I8 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-1Q5R1I8 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-1Q5R1I8 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-1Q5R1I8 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-1Q5R1I8 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-1Q5R1I8 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-1Q5R1I8 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-1Q5R1I8 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-1Q5R1I8 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-1Q5R1I8 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-1Q5R1I8 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-1Q5R1I8 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-1Q5R1I8 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-1Q5R1I8 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-1Q5R1I8 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-1Q5R1I8 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-1Q5R1I8 Gm7332-201ENSMUST00000118351 454 ntBASIC10.54□□□□□ -0.72
Trav3-1Q5R1I8 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC10.54□□□□□ -0.72
Trav3-1Q5R1I8 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Trav3-1Q5R1I8 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Trav3-1Q5R1I8 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms