Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC13.44□□□□□ -0.26
Trav5d-4Q5R1F6 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC13.44□□□□□ -0.26
Trav5d-4Q5R1F6 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav5d-4Q5R1F6 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Trav5d-4Q5R1F6 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Trav5d-4Q5R1F6 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC13.44□□□□□ -0.26
Trav5d-4Q5R1F6 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC13.44□□□□□ -0.26
Trav5d-4Q5R1F6 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Trav5d-4Q5R1F6 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav5d-4Q5R1F6 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC13.44□□□□□ -0.26
Trav5d-4Q5R1F6 Gm25406-201ENSMUST00000157599 105 ntBASIC13.44□□□□□ -0.26
Trav5d-4Q5R1F6 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav5d-4Q5R1F6 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC13.44□□□□□ -0.26
Trav5d-4Q5R1F6 Gm8349-201ENSMUST00000182720 1003 ntBASIC13.44□□□□□ -0.26
Trav5d-4Q5R1F6 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC13.44□□□□□ -0.26
Trav5d-4Q5R1F6 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC13.44□□□□□ -0.26
Trav5d-4Q5R1F6 Gm44454-201ENSMUST00000198541 138 ntBASIC13.44□□□□□ -0.26
Trav5d-4Q5R1F6 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC13.44□□□□□ -0.26
Trav5d-4Q5R1F6 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav5d-4Q5R1F6 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Trav5d-4Q5R1F6 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav5d-4Q5R1F6 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav5d-4Q5R1F6 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav5d-4Q5R1F6 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Trav5d-4Q5R1F6 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav5d-4Q5R1F6 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav5d-4Q5R1F6 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav5d-4Q5R1F6 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
Trav5d-4Q5R1F6 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav5d-4Q5R1F6 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Trav5d-4Q5R1F6 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav5d-4Q5R1F6 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav5d-4Q5R1F6 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Trav5d-4Q5R1F6 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Trav5d-4Q5R1F6 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav5d-4Q5R1F6 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav5d-4Q5R1F6 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Trav5d-4Q5R1F6 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav5d-4Q5R1F6 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav5d-4Q5R1F6 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav5d-4Q5R1F6 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Trav5d-4Q5R1F6 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Trav5d-4Q5R1F6 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Trav5d-4Q5R1F6 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav5d-4Q5R1F6 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav5d-4Q5R1F6 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav5d-4Q5R1F6 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav5d-4Q5R1F6 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav5d-4Q5R1F6 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC13.43□□□□□ -0.26
Trav5d-4Q5R1F6 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
Trav5d-4Q5R1F6 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav5d-4Q5R1F6 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav5d-4Q5R1F6 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav5d-4Q5R1F6 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav5d-4Q5R1F6 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav5d-4Q5R1F6 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav5d-4Q5R1F6 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav5d-4Q5R1F6 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC13.43□□□□□ -0.26
Trav5d-4Q5R1F6 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Trav5d-4Q5R1F6 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav5d-4Q5R1F6 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav5d-4Q5R1F6 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav5d-4Q5R1F6 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav5d-4Q5R1F6 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav5d-4Q5R1F6 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav5d-4Q5R1F6 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
Trav5d-4Q5R1F6 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav5d-4Q5R1F6 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav5d-4Q5R1F6 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Trav5d-4Q5R1F6 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav5d-4Q5R1F6 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav5d-4Q5R1F6 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav5d-4Q5R1F6 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav5d-4Q5R1F6 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Trav5d-4Q5R1F6 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav5d-4Q5R1F6 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav5d-4Q5R1F6 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav5d-4Q5R1F6 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav5d-4Q5R1F6 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav5d-4Q5R1F6 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC13.42□□□□□ -0.26
Trav5d-4Q5R1F6 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.42□□□□□ -0.26
Trav5d-4Q5R1F6 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav5d-4Q5R1F6 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trav5d-4Q5R1F6 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav5d-4Q5R1F6 Gm14859-201ENSMUST00000117752 357 ntBASIC13.42□□□□□ -0.26
Trav5d-4Q5R1F6 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav5d-4Q5R1F6 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC13.42□□□□□ -0.26
Trav5d-4Q5R1F6 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC13.42□□□□□ -0.26
Trav5d-4Q5R1F6 AC127349.1-201ENSMUST00000224590 266 ntBASIC13.42□□□□□ -0.26
Trav5d-4Q5R1F6 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav5d-4Q5R1F6 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav5d-4Q5R1F6 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav5d-4Q5R1F6 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Trav5d-4Q5R1F6 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav5d-4Q5R1F6 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav5d-4Q5R1F6 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav5d-4Q5R1F6 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav5d-4Q5R1F6 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav5d-4Q5R1F6 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC13.42□□□□□ -0.26
Trav5d-4Q5R1F6 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms