Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC12.17□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC12.17□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Arhgef4-208ENSMUST00000211073 171 ntBASIC12.17□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Gm7370-201ENSMUST00000219471 767 ntBASIC12.17□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC12.17□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC12.16□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Gm4217-201ENSMUST00000182243 1002 ntBASIC12.16□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Gm11839-201ENSMUST00000120647 1953 ntBASIC12.16□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Spsb2-203ENSMUST00000112473 1322 ntBASIC12.15□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 AC153881.1-201ENSMUST00000214448 284 ntBASIC12.15□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms