Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Gm7935-201ENSMUST00000100555 1278 ntBASIC19.73■□□□□ 0.75
Trim58Q5NCC9 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC19.73■□□□□ 0.75
Trim58Q5NCC9 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trim58Q5NCC9 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
Trim58Q5NCC9 AC159093.1-201ENSMUST00000227779 380 ntBASIC19.73■□□□□ 0.75
Trim58Q5NCC9 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim58Q5NCC9 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Trim58Q5NCC9 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim58Q5NCC9 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim58Q5NCC9 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim58Q5NCC9 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Trim58Q5NCC9 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Trim58Q5NCC9 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
Trim58Q5NCC9 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim58Q5NCC9 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim58Q5NCC9 Gm5837-201ENSMUST00000191844 1369 ntBASIC19.72■□□□□ 0.75
Trim58Q5NCC9 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim58Q5NCC9 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim58Q5NCC9 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim58Q5NCC9 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
Trim58Q5NCC9 Gm8344-201ENSMUST00000119813 856 ntBASIC19.72■□□□□ 0.75
Trim58Q5NCC9 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim58Q5NCC9 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
Trim58Q5NCC9 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim58Q5NCC9 Gm8655-201ENSMUST00000221159 852 ntBASIC19.72■□□□□ 0.75
Trim58Q5NCC9 AC160980.1-201ENSMUST00000224136 970 ntBASIC19.72■□□□□ 0.75
Trim58Q5NCC9 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim58Q5NCC9 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim58Q5NCC9 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim58Q5NCC9 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Trim58Q5NCC9 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim58Q5NCC9 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim58Q5NCC9 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Trim58Q5NCC9 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trim58Q5NCC9 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Trim58Q5NCC9 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trim58Q5NCC9 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trim58Q5NCC9 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trim58Q5NCC9 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim58Q5NCC9 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim58Q5NCC9 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim58Q5NCC9 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim58Q5NCC9 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim58Q5NCC9 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim58Q5NCC9 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trim58Q5NCC9 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trim58Q5NCC9 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim58Q5NCC9 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC19.71■□□□□ 0.75
Trim58Q5NCC9 Gm18669-201ENSMUST00000216049 778 ntBASIC19.71■□□□□ 0.75
Trim58Q5NCC9 Cmtm5-203ENSMUST00000227441 610 ntBASIC19.71■□□□□ 0.75
Trim58Q5NCC9 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim58Q5NCC9 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim58Q5NCC9 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim58Q5NCC9 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim58Q5NCC9 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim58Q5NCC9 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim58Q5NCC9 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim58Q5NCC9 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim58Q5NCC9 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim58Q5NCC9 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC19.71■□□□□ 0.75
Trim58Q5NCC9 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Trim58Q5NCC9 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim58Q5NCC9 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim58Q5NCC9 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trim58Q5NCC9 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim58Q5NCC9 Gm11839-201ENSMUST00000120647 1953 ntBASIC19.7■□□□□ 0.74
Trim58Q5NCC9 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC19.7■□□□□ 0.74
Trim58Q5NCC9 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim58Q5NCC9 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim58Q5NCC9 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim58Q5NCC9 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trim58Q5NCC9 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC19.7■□□□□ 0.74
Trim58Q5NCC9 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC19.7■□□□□ 0.74
Trim58Q5NCC9 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC19.7■□□□□ 0.74
Trim58Q5NCC9 Gm12644-201ENSMUST00000119935 606 ntBASIC19.7■□□□□ 0.74
Trim58Q5NCC9 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC19.7■□□□□ 0.74
Trim58Q5NCC9 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim58Q5NCC9 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Trim58Q5NCC9 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trim58Q5NCC9 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim58Q5NCC9 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim58Q5NCC9 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim58Q5NCC9 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim58Q5NCC9 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim58Q5NCC9 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Trim58Q5NCC9 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
Trim58Q5NCC9 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim58Q5NCC9 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Trim58Q5NCC9 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim58Q5NCC9 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim58Q5NCC9 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim58Q5NCC9 Ank2-226ENSMUST00000189368 339 ntBASIC19.69■□□□□ 0.74
Trim58Q5NCC9 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim58Q5NCC9 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trim58Q5NCC9 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC19.69■□□□□ 0.74
Trim58Q5NCC9 AC158538.2-201ENSMUST00000225455 906 ntBASIC19.69■□□□□ 0.74
Trim58Q5NCC9 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim58Q5NCC9 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim58Q5NCC9 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim58Q5NCC9 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms