Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Urb1Q571H0 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Urb1Q571H0 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Urb1Q571H0 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.35□□□□□ -0.11
Urb1Q571H0 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Urb1Q571H0 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Urb1Q571H0 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Urb1Q571H0 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Urb1Q571H0 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC14.35□□□□□ -0.11
Urb1Q571H0 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Urb1Q571H0 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC14.35□□□□□ -0.11
Urb1Q571H0 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Urb1Q571H0 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Urb1Q571H0 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC14.35□□□□□ -0.11
Urb1Q571H0 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Urb1Q571H0 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Urb1Q571H0 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.35□□□□□ -0.11
Urb1Q571H0 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Urb1Q571H0 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Urb1Q571H0 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.34□□□□□ -0.11
Urb1Q571H0 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Urb1Q571H0 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Urb1Q571H0 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC14.34□□□□□ -0.11
Urb1Q571H0 Gm13365-201ENSMUST00000121188 973 ntBASIC14.34□□□□□ -0.11
Urb1Q571H0 Gm5745-201ENSMUST00000183748 313 ntBASIC14.34□□□□□ -0.11
Urb1Q571H0 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.34□□□□□ -0.11
Urb1Q571H0 Gm45612-201ENSMUST00000211320 160 ntBASIC14.34□□□□□ -0.11
Urb1Q571H0 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Urb1Q571H0 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Urb1Q571H0 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Urb1Q571H0 AC121598.2-201ENSMUST00000228376 2325 ntBASIC14.34□□□□□ -0.11
Urb1Q571H0 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Urb1Q571H0 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Urb1Q571H0 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Urb1Q571H0 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.34□□□□□ -0.11
Urb1Q571H0 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Urb1Q571H0 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Urb1Q571H0 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Urb1Q571H0 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Urb1Q571H0 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Urb1Q571H0 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Urb1Q571H0 Gm9385-201ENSMUST00000117563 472 ntBASIC14.34□□□□□ -0.11
Urb1Q571H0 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Urb1Q571H0 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC14.34□□□□□ -0.11
Urb1Q571H0 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Urb1Q571H0 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Urb1Q571H0 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Urb1Q571H0 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Urb1Q571H0 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Urb1Q571H0 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
Urb1Q571H0 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.33□□□□□ -0.11
Urb1Q571H0 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Urb1Q571H0 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Urb1Q571H0 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Urb1Q571H0 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Urb1Q571H0 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Urb1Q571H0 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Urb1Q571H0 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Urb1Q571H0 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Urb1Q571H0 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Urb1Q571H0 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Urb1Q571H0 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Urb1Q571H0 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.33□□□□□ -0.12
Urb1Q571H0 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Urb1Q571H0 Gm43767-201ENSMUST00000198933 381 ntBASIC14.33□□□□□ -0.12
Urb1Q571H0 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.33□□□□□ -0.12
Urb1Q571H0 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Urb1Q571H0 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.33□□□□□ -0.12
Urb1Q571H0 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Urb1Q571H0 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Urb1Q571H0 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Urb1Q571H0 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Urb1Q571H0 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Urb1Q571H0 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Urb1Q571H0 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Urb1Q571H0 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Urb1Q571H0 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Urb1Q571H0 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Urb1Q571H0 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Urb1Q571H0 Gm15358-201ENSMUST00000119249 520 ntBASIC14.32□□□□□ -0.12
Urb1Q571H0 Gm12428-201ENSMUST00000119844 727 ntBASIC14.32□□□□□ -0.12
Urb1Q571H0 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.32□□□□□ -0.12
Urb1Q571H0 Gm9682-201ENSMUST00000197505 556 ntBASIC14.32□□□□□ -0.12
Urb1Q571H0 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Urb1Q571H0 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Urb1Q571H0 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Urb1Q571H0 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Urb1Q571H0 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Urb1Q571H0 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Urb1Q571H0 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Urb1Q571H0 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Urb1Q571H0 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Urb1Q571H0 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Urb1Q571H0 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Urb1Q571H0 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Urb1Q571H0 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Urb1Q571H0 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Urb1Q571H0 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Urb1Q571H0 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Urb1Q571H0 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms