Protein–RNA interactions for Protein: Q3UP44

Nhlrc4, NHL-repeat-containing protein 4, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc4Q3UP44 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.32□□□□□ -0.12
Nhlrc4Q3UP44 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nhlrc4Q3UP44 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.32□□□□□ -0.12
Nhlrc4Q3UP44 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nhlrc4Q3UP44 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nhlrc4Q3UP44 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nhlrc4Q3UP44 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nhlrc4Q3UP44 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nhlrc4Q3UP44 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Nhlrc4Q3UP44 Gm14722-201ENSMUST00000118943 689 ntBASIC14.32□□□□□ -0.12
Nhlrc4Q3UP44 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.32□□□□□ -0.12
Nhlrc4Q3UP44 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Nhlrc4Q3UP44 Gm5682-201ENSMUST00000173402 505 ntBASIC14.32□□□□□ -0.12
Nhlrc4Q3UP44 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.32□□□□□ -0.12
Nhlrc4Q3UP44 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nhlrc4Q3UP44 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nhlrc4Q3UP44 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nhlrc4Q3UP44 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nhlrc4Q3UP44 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nhlrc4Q3UP44 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nhlrc4Q3UP44 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nhlrc4Q3UP44 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nhlrc4Q3UP44 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nhlrc4Q3UP44 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nhlrc4Q3UP44 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nhlrc4Q3UP44 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nhlrc4Q3UP44 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nhlrc4Q3UP44 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nhlrc4Q3UP44 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nhlrc4Q3UP44 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nhlrc4Q3UP44 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nhlrc4Q3UP44 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nhlrc4Q3UP44 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.31□□□□□ -0.12
Nhlrc4Q3UP44 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nhlrc4Q3UP44 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nhlrc4Q3UP44 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nhlrc4Q3UP44 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
Nhlrc4Q3UP44 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nhlrc4Q3UP44 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nhlrc4Q3UP44 Gm15173-201ENSMUST00000122049 433 ntBASIC14.31□□□□□ -0.12
Nhlrc4Q3UP44 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.31□□□□□ -0.12
Nhlrc4Q3UP44 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.31□□□□□ -0.12
Nhlrc4Q3UP44 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.31□□□□□ -0.12
Nhlrc4Q3UP44 Gm7230-201ENSMUST00000173026 815 ntBASIC14.31□□□□□ -0.12
Nhlrc4Q3UP44 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Nhlrc4Q3UP44 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nhlrc4Q3UP44 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nhlrc4Q3UP44 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.31□□□□□ -0.12
Nhlrc4Q3UP44 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Nhlrc4Q3UP44 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Nhlrc4Q3UP44 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Nhlrc4Q3UP44 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nhlrc4Q3UP44 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nhlrc4Q3UP44 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nhlrc4Q3UP44 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nhlrc4Q3UP44 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nhlrc4Q3UP44 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nhlrc4Q3UP44 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nhlrc4Q3UP44 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nhlrc4Q3UP44 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nhlrc4Q3UP44 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nhlrc4Q3UP44 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nhlrc4Q3UP44 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nhlrc4Q3UP44 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nhlrc4Q3UP44 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nhlrc4Q3UP44 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nhlrc4Q3UP44 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nhlrc4Q3UP44 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nhlrc4Q3UP44 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Nhlrc4Q3UP44 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nhlrc4Q3UP44 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nhlrc4Q3UP44 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Nhlrc4Q3UP44 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nhlrc4Q3UP44 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nhlrc4Q3UP44 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nhlrc4Q3UP44 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Nhlrc4Q3UP44 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nhlrc4Q3UP44 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nhlrc4Q3UP44 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nhlrc4Q3UP44 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nhlrc4Q3UP44 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nhlrc4Q3UP44 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nhlrc4Q3UP44 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Nhlrc4Q3UP44 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Nhlrc4Q3UP44 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Nhlrc4Q3UP44 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Nhlrc4Q3UP44 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nhlrc4Q3UP44 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nhlrc4Q3UP44 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.29□□□□□ -0.12
Nhlrc4Q3UP44 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nhlrc4Q3UP44 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Nhlrc4Q3UP44 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nhlrc4Q3UP44 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Nhlrc4Q3UP44 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Nhlrc4Q3UP44 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nhlrc4Q3UP44 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nhlrc4Q3UP44 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nhlrc4Q3UP44 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nhlrc4Q3UP44 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Nhlrc4Q3UP44 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms