Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Gm45203-201ENSMUST00000206384 1831 ntBASIC11.29□□□□□ -0.6
Cks1brtQ3UNC9 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cks1brtQ3UNC9 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC11.29□□□□□ -0.6
Cks1brtQ3UNC9 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Cks1brtQ3UNC9 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cks1brtQ3UNC9 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cks1brtQ3UNC9 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Cks1brtQ3UNC9 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Cks1brtQ3UNC9 Phf7-203ENSMUST00000226565 1971 ntBASIC11.28□□□□□ -0.6
Cks1brtQ3UNC9 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cks1brtQ3UNC9 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cks1brtQ3UNC9 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cks1brtQ3UNC9 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.28□□□□□ -0.6
Cks1brtQ3UNC9 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cks1brtQ3UNC9 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cks1brtQ3UNC9 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cks1brtQ3UNC9 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cks1brtQ3UNC9 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cks1brtQ3UNC9 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cks1brtQ3UNC9 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Cks1brtQ3UNC9 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC11.28□□□□□ -0.6
Cks1brtQ3UNC9 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cks1brtQ3UNC9 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cks1brtQ3UNC9 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cks1brtQ3UNC9 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC11.28□□□□□ -0.6
Cks1brtQ3UNC9 Mir6349-201ENSMUST00000184059 97 ntBASIC11.28□□□□□ -0.6
Cks1brtQ3UNC9 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC11.28□□□□□ -0.6
Cks1brtQ3UNC9 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cks1brtQ3UNC9 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC11.28□□□□□ -0.6
Cks1brtQ3UNC9 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
Cks1brtQ3UNC9 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cks1brtQ3UNC9 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC11.28□□□□□ -0.6
Cks1brtQ3UNC9 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cks1brtQ3UNC9 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Cks1brtQ3UNC9 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cks1brtQ3UNC9 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cks1brtQ3UNC9 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC11.28□□□□□ -0.6
Cks1brtQ3UNC9 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Cks1brtQ3UNC9 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cks1brtQ3UNC9 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cks1brtQ3UNC9 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Cks1brtQ3UNC9 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cks1brtQ3UNC9 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cks1brtQ3UNC9 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cks1brtQ3UNC9 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cks1brtQ3UNC9 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC11.28□□□□□ -0.6
Cks1brtQ3UNC9 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cks1brtQ3UNC9 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cks1brtQ3UNC9 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cks1brtQ3UNC9 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cks1brtQ3UNC9 Gm10654-201ENSMUST00000098653 1633 ntBASIC11.27□□□□□ -0.6
Cks1brtQ3UNC9 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cks1brtQ3UNC9 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cks1brtQ3UNC9 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cks1brtQ3UNC9 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cks1brtQ3UNC9 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Cks1brtQ3UNC9 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cks1brtQ3UNC9 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC11.27□□□□□ -0.6
Cks1brtQ3UNC9 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cks1brtQ3UNC9 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Cks1brtQ3UNC9 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cks1brtQ3UNC9 Gm10605-202ENSMUST00000183019 3198 ntBASIC11.27□□□□□ -0.6
Cks1brtQ3UNC9 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Cks1brtQ3UNC9 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cks1brtQ3UNC9 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC11.27□□□□□ -0.61
Cks1brtQ3UNC9 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Cks1brtQ3UNC9 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cks1brtQ3UNC9 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cks1brtQ3UNC9 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cks1brtQ3UNC9 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cks1brtQ3UNC9 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Cks1brtQ3UNC9 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cks1brtQ3UNC9 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cks1brtQ3UNC9 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cks1brtQ3UNC9 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cks1brtQ3UNC9 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cks1brtQ3UNC9 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Cks1brtQ3UNC9 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cks1brtQ3UNC9 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cks1brtQ3UNC9 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Cks1brtQ3UNC9 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cks1brtQ3UNC9 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cks1brtQ3UNC9 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cks1brtQ3UNC9 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC11.27□□□□□ -0.61
Cks1brtQ3UNC9 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cks1brtQ3UNC9 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC11.27□□□□□ -0.61
Cks1brtQ3UNC9 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cks1brtQ3UNC9 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cks1brtQ3UNC9 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cks1brtQ3UNC9 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cks1brtQ3UNC9 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cks1brtQ3UNC9 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cks1brtQ3UNC9 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
Cks1brtQ3UNC9 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cks1brtQ3UNC9 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cks1brtQ3UNC9 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cks1brtQ3UNC9 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Cks1brtQ3UNC9 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cks1brtQ3UNC9 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Cks1brtQ3UNC9 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms