Protein–RNA interactions for Protein: Q3UHD6

Snx27, Sorting nexin-27, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx27Q3UHD6 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Snx27Q3UHD6 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Snx27Q3UHD6 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Snx27Q3UHD6 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Snx27Q3UHD6 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Snx27Q3UHD6 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.82■□□□□ 0.28
Snx27Q3UHD6 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Snx27Q3UHD6 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.82■□□□□ 0.28
Snx27Q3UHD6 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Snx27Q3UHD6 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Snx27Q3UHD6 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Snx27Q3UHD6 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Snx27Q3UHD6 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Snx27Q3UHD6 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Snx27Q3UHD6 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.82■□□□□ 0.28
Snx27Q3UHD6 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Snx27Q3UHD6 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Snx27Q3UHD6 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC16.82■□□□□ 0.28
Snx27Q3UHD6 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Snx27Q3UHD6 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC16.82■□□□□ 0.28
Snx27Q3UHD6 Gm43575-201ENSMUST00000196420 516 ntBASIC16.82■□□□□ 0.28
Snx27Q3UHD6 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Snx27Q3UHD6 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Snx27Q3UHD6 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Snx27Q3UHD6 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Snx27Q3UHD6 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.82■□□□□ 0.28
Snx27Q3UHD6 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Snx27Q3UHD6 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Snx27Q3UHD6 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Snx27Q3UHD6 Gm5184-201ENSMUST00000220417 1702 ntBASIC16.82■□□□□ 0.28
Snx27Q3UHD6 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Snx27Q3UHD6 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Snx27Q3UHD6 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Snx27Q3UHD6 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Snx27Q3UHD6 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Snx27Q3UHD6 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Snx27Q3UHD6 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
Snx27Q3UHD6 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Snx27Q3UHD6 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Snx27Q3UHD6 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Snx27Q3UHD6 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Snx27Q3UHD6 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Snx27Q3UHD6 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Snx27Q3UHD6 Gm17968-201ENSMUST00000194902 784 ntBASIC16.81■□□□□ 0.28
Snx27Q3UHD6 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Snx27Q3UHD6 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Snx27Q3UHD6 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Snx27Q3UHD6 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Snx27Q3UHD6 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Snx27Q3UHD6 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Snx27Q3UHD6 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Snx27Q3UHD6 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.8■□□□□ 0.28
Snx27Q3UHD6 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Snx27Q3UHD6 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Snx27Q3UHD6 Gm23935-201ENSMUST00000102303 57 ntBASIC16.8■□□□□ 0.28
Snx27Q3UHD6 Gm24270-201ENSMUST00000102326 57 ntBASIC16.8■□□□□ 0.28
Snx27Q3UHD6 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Snx27Q3UHD6 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC16.8■□□□□ 0.28
Snx27Q3UHD6 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Snx27Q3UHD6 Gm4913-201ENSMUST00000117075 1290 ntBASIC16.8■□□□□ 0.28
Snx27Q3UHD6 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC16.8■□□□□ 0.28
Snx27Q3UHD6 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC16.8■□□□□ 0.28
Snx27Q3UHD6 Gm24245-201ENSMUST00000157318 57 ntBASIC16.8■□□□□ 0.28
Snx27Q3UHD6 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Snx27Q3UHD6 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Snx27Q3UHD6 AC154572.2-201ENSMUST00000225105 997 ntBASIC16.8■□□□□ 0.28
Snx27Q3UHD6 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Snx27Q3UHD6 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.8■□□□□ 0.28
Snx27Q3UHD6 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Snx27Q3UHD6 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Snx27Q3UHD6 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Snx27Q3UHD6 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC16.8■□□□□ 0.28
Snx27Q3UHD6 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Snx27Q3UHD6 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Snx27Q3UHD6 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.8■□□□□ 0.28
Snx27Q3UHD6 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Snx27Q3UHD6 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.8■□□□□ 0.28
Snx27Q3UHD6 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Snx27Q3UHD6 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Snx27Q3UHD6 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Snx27Q3UHD6 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.79■□□□□ 0.28
Snx27Q3UHD6 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Snx27Q3UHD6 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Snx27Q3UHD6 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Snx27Q3UHD6 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Snx27Q3UHD6 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC16.79■□□□□ 0.28
Snx27Q3UHD6 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Snx27Q3UHD6 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Snx27Q3UHD6 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC16.79■□□□□ 0.28
Snx27Q3UHD6 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Snx27Q3UHD6 Gm18246-201ENSMUST00000221023 728 ntBASIC16.79■□□□□ 0.28
Snx27Q3UHD6 Ndufaf2-202ENSMUST00000223734 556 ntBASIC16.79■□□□□ 0.28
Snx27Q3UHD6 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Snx27Q3UHD6 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Snx27Q3UHD6 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Snx27Q3UHD6 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Snx27Q3UHD6 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Snx27Q3UHD6 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Snx27Q3UHD6 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16.79■□□□□ 0.28
Snx27Q3UHD6 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms