Protein–RNA interactions for Protein: Q3U2A8

Vars2, Valine--tRNA ligase, mitochondrial, mousemouse

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vars2Q3U2A8 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC19.24■□□□□ 0.67
Vars2Q3U2A8 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vars2Q3U2A8 AC158529.1-201ENSMUST00000223618 239 ntBASIC19.24■□□□□ 0.67
Vars2Q3U2A8 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vars2Q3U2A8 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vars2Q3U2A8 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC19.24■□□□□ 0.67
Vars2Q3U2A8 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vars2Q3U2A8 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Vars2Q3U2A8 Gm42466-201ENSMUST00000202099 1301 ntBASIC19.24■□□□□ 0.67
Vars2Q3U2A8 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Vars2Q3U2A8 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vars2Q3U2A8 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vars2Q3U2A8 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
Vars2Q3U2A8 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Vars2Q3U2A8 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC19.23■□□□□ 0.67
Vars2Q3U2A8 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Vars2Q3U2A8 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC19.23■□□□□ 0.67
Vars2Q3U2A8 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Vars2Q3U2A8 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Vars2Q3U2A8 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Vars2Q3U2A8 Gm45195-201ENSMUST00000205597 1008 ntBASIC19.23■□□□□ 0.67
Vars2Q3U2A8 Gm45668-201ENSMUST00000211271 493 ntBASIC19.23■□□□□ 0.67
Vars2Q3U2A8 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.23■□□□□ 0.67
Vars2Q3U2A8 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vars2Q3U2A8 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vars2Q3U2A8 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vars2Q3U2A8 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Vars2Q3U2A8 Gm5898-201ENSMUST00000121016 2071 ntBASIC19.23■□□□□ 0.67
Vars2Q3U2A8 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
Vars2Q3U2A8 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vars2Q3U2A8 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vars2Q3U2A8 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Vars2Q3U2A8 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC19.22■□□□□ 0.67
Vars2Q3U2A8 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vars2Q3U2A8 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vars2Q3U2A8 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
Vars2Q3U2A8 Ighv8-7-201ENSMUST00000194349 297 ntBASIC19.22■□□□□ 0.67
Vars2Q3U2A8 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC19.22■□□□□ 0.67
Vars2Q3U2A8 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vars2Q3U2A8 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vars2Q3U2A8 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vars2Q3U2A8 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Vars2Q3U2A8 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Vars2Q3U2A8 Gm13233-201ENSMUST00000118760 1443 ntBASIC19.22■□□□□ 0.67
Vars2Q3U2A8 Gm13244-201ENSMUST00000118855 1446 ntBASIC19.22■□□□□ 0.67
Vars2Q3U2A8 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vars2Q3U2A8 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vars2Q3U2A8 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vars2Q3U2A8 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vars2Q3U2A8 Prkcz2-201ENSMUST00000206136 1756 ntBASIC19.21■□□□□ 0.67
Vars2Q3U2A8 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Vars2Q3U2A8 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Vars2Q3U2A8 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vars2Q3U2A8 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Vars2Q3U2A8 Gm36858-201ENSMUST00000194501 2391 ntBASIC19.21■□□□□ 0.67
Vars2Q3U2A8 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Vars2Q3U2A8 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vars2Q3U2A8 Gm5320-201ENSMUST00000207163 1519 ntBASIC19.21■□□□□ 0.67
Vars2Q3U2A8 Gm22189-201ENSMUST00000103822 86 ntBASIC19.21■□□□□ 0.67
Vars2Q3U2A8 Gm24543-201ENSMUST00000103867 82 ntBASIC19.21■□□□□ 0.67
Vars2Q3U2A8 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vars2Q3U2A8 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vars2Q3U2A8 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Vars2Q3U2A8 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC19.21■□□□□ 0.67
Vars2Q3U2A8 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC19.21■□□□□ 0.67
Vars2Q3U2A8 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vars2Q3U2A8 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vars2Q3U2A8 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vars2Q3U2A8 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vars2Q3U2A8 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Vars2Q3U2A8 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vars2Q3U2A8 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vars2Q3U2A8 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC19.21■□□□□ 0.67
Vars2Q3U2A8 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vars2Q3U2A8 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Vars2Q3U2A8 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vars2Q3U2A8 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vars2Q3U2A8 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vars2Q3U2A8 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vars2Q3U2A8 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vars2Q3U2A8 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vars2Q3U2A8 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vars2Q3U2A8 Gm42612-201ENSMUST00000197986 623 ntBASIC19.2■□□□□ 0.66
Vars2Q3U2A8 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC19.2■□□□□ 0.66
Vars2Q3U2A8 Gm43170-201ENSMUST00000199827 612 ntBASIC19.2■□□□□ 0.66
Vars2Q3U2A8 Gm42790-201ENSMUST00000201268 969 ntBASIC19.2■□□□□ 0.66
Vars2Q3U2A8 Shd-206ENSMUST00000225145 998 ntBASIC19.2■□□□□ 0.66
Vars2Q3U2A8 AC155729.1-201ENSMUST00000227758 544 ntBASIC19.2■□□□□ 0.66
Vars2Q3U2A8 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vars2Q3U2A8 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vars2Q3U2A8 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vars2Q3U2A8 Gm15823-201ENSMUST00000064305 670 ntBASIC19.2■□□□□ 0.66
Vars2Q3U2A8 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Vars2Q3U2A8 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vars2Q3U2A8 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vars2Q3U2A8 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vars2Q3U2A8 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vars2Q3U2A8 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vars2Q3U2A8 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.2■□□□□ 0.66
Vars2Q3U2A8 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms