Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cul4aQ3TCH7 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cul4aQ3TCH7 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cul4aQ3TCH7 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.39■□□□□ 0.21
Cul4aQ3TCH7 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cul4aQ3TCH7 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Cul4aQ3TCH7 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cul4aQ3TCH7 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cul4aQ3TCH7 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
Cul4aQ3TCH7 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cul4aQ3TCH7 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cul4aQ3TCH7 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cul4aQ3TCH7 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cul4aQ3TCH7 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cul4aQ3TCH7 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cul4aQ3TCH7 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
Cul4aQ3TCH7 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cul4aQ3TCH7 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cul4aQ3TCH7 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
Cul4aQ3TCH7 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cul4aQ3TCH7 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cul4aQ3TCH7 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cul4aQ3TCH7 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cul4aQ3TCH7 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cul4aQ3TCH7 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cul4aQ3TCH7 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cul4aQ3TCH7 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Cul4aQ3TCH7 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cul4aQ3TCH7 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cul4aQ3TCH7 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cul4aQ3TCH7 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cul4aQ3TCH7 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cul4aQ3TCH7 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cul4aQ3TCH7 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cul4aQ3TCH7 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cul4aQ3TCH7 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cul4aQ3TCH7 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cul4aQ3TCH7 Gm11960-202ENSMUST00000181063 2858 ntBASIC16.37■□□□□ 0.21
Cul4aQ3TCH7 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cul4aQ3TCH7 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cul4aQ3TCH7 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cul4aQ3TCH7 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC16.37■□□□□ 0.21
Cul4aQ3TCH7 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cul4aQ3TCH7 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cul4aQ3TCH7 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cul4aQ3TCH7 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cul4aQ3TCH7 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Cul4aQ3TCH7 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Cul4aQ3TCH7 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Cul4aQ3TCH7 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
Cul4aQ3TCH7 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.37■□□□□ 0.21
Cul4aQ3TCH7 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cul4aQ3TCH7 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Cul4aQ3TCH7 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Cul4aQ3TCH7 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cul4aQ3TCH7 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cul4aQ3TCH7 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cul4aQ3TCH7 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cul4aQ3TCH7 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cul4aQ3TCH7 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cul4aQ3TCH7 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cul4aQ3TCH7 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.37■□□□□ 0.21
Cul4aQ3TCH7 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cul4aQ3TCH7 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cul4aQ3TCH7 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
Cul4aQ3TCH7 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cul4aQ3TCH7 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cul4aQ3TCH7 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cul4aQ3TCH7 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cul4aQ3TCH7 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cul4aQ3TCH7 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cul4aQ3TCH7 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Cul4aQ3TCH7 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.37■□□□□ 0.21
Cul4aQ3TCH7 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cul4aQ3TCH7 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cul4aQ3TCH7 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cul4aQ3TCH7 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cul4aQ3TCH7 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cul4aQ3TCH7 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Cul4aQ3TCH7 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cul4aQ3TCH7 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cul4aQ3TCH7 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cul4aQ3TCH7 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cul4aQ3TCH7 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cul4aQ3TCH7 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cul4aQ3TCH7 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cul4aQ3TCH7 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cul4aQ3TCH7 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Cul4aQ3TCH7 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cul4aQ3TCH7 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cul4aQ3TCH7 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cul4aQ3TCH7 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cul4aQ3TCH7 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC16.36■□□□□ 0.21
Cul4aQ3TCH7 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Cul4aQ3TCH7 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.36■□□□□ 0.21
Cul4aQ3TCH7 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.36■□□□□ 0.21
Cul4aQ3TCH7 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.36■□□□□ 0.21
Cul4aQ3TCH7 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.36■□□□□ 0.21
Cul4aQ3TCH7 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.36■□□□□ 0.21
Cul4aQ3TCH7 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms