Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccbe1Q3MI99 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccbe1Q3MI99 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccbe1Q3MI99 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Ccbe1Q3MI99 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Ccbe1Q3MI99 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccbe1Q3MI99 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.15□□□□□ -0.14
Ccbe1Q3MI99 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccbe1Q3MI99 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Ccbe1Q3MI99 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Ccbe1Q3MI99 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccbe1Q3MI99 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccbe1Q3MI99 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccbe1Q3MI99 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccbe1Q3MI99 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccbe1Q3MI99 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccbe1Q3MI99 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccbe1Q3MI99 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC14.15□□□□□ -0.15
Ccbe1Q3MI99 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Ccbe1Q3MI99 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Ccbe1Q3MI99 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccbe1Q3MI99 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccbe1Q3MI99 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Ccbe1Q3MI99 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccbe1Q3MI99 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccbe1Q3MI99 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccbe1Q3MI99 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccbe1Q3MI99 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccbe1Q3MI99 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccbe1Q3MI99 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccbe1Q3MI99 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.14□□□□□ -0.15
Ccbe1Q3MI99 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccbe1Q3MI99 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC14.14□□□□□ -0.15
Ccbe1Q3MI99 Gm27275-201ENSMUST00000184318 272 ntBASIC14.14□□□□□ -0.15
Ccbe1Q3MI99 Gm38376-201ENSMUST00000195493 2253 ntBASIC14.14□□□□□ -0.15
Ccbe1Q3MI99 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccbe1Q3MI99 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.14□□□□□ -0.15
Ccbe1Q3MI99 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccbe1Q3MI99 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ccbe1Q3MI99 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccbe1Q3MI99 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccbe1Q3MI99 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Ccbe1Q3MI99 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccbe1Q3MI99 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccbe1Q3MI99 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccbe1Q3MI99 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccbe1Q3MI99 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Ccbe1Q3MI99 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccbe1Q3MI99 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccbe1Q3MI99 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.13□□□□□ -0.15
Ccbe1Q3MI99 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.13□□□□□ -0.15
Ccbe1Q3MI99 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Ccbe1Q3MI99 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccbe1Q3MI99 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccbe1Q3MI99 AC153366.2-201ENSMUST00000219461 1984 ntBASIC14.13□□□□□ -0.15
Ccbe1Q3MI99 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Ccbe1Q3MI99 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccbe1Q3MI99 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccbe1Q3MI99 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccbe1Q3MI99 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC14.13□□□□□ -0.15
Ccbe1Q3MI99 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC14.13□□□□□ -0.15
Ccbe1Q3MI99 AC135963.1-201ENSMUST00000211640 717 ntBASIC14.13□□□□□ -0.15
Ccbe1Q3MI99 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccbe1Q3MI99 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccbe1Q3MI99 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccbe1Q3MI99 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccbe1Q3MI99 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.13□□□□□ -0.15
Ccbe1Q3MI99 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccbe1Q3MI99 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccbe1Q3MI99 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccbe1Q3MI99 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccbe1Q3MI99 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccbe1Q3MI99 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccbe1Q3MI99 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Ccbe1Q3MI99 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccbe1Q3MI99 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.13□□□□□ -0.15
Ccbe1Q3MI99 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Ccbe1Q3MI99 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccbe1Q3MI99 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccbe1Q3MI99 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccbe1Q3MI99 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccbe1Q3MI99 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccbe1Q3MI99 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccbe1Q3MI99 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccbe1Q3MI99 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Ccbe1Q3MI99 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccbe1Q3MI99 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC14.12□□□□□ -0.15
Ccbe1Q3MI99 Gm17661-201ENSMUST00000170317 270 ntBASIC14.12□□□□□ -0.15
Ccbe1Q3MI99 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccbe1Q3MI99 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccbe1Q3MI99 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccbe1Q3MI99 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Ccbe1Q3MI99 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccbe1Q3MI99 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccbe1Q3MI99 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccbe1Q3MI99 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccbe1Q3MI99 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccbe1Q3MI99 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccbe1Q3MI99 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccbe1Q3MI99 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms