Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nhej1Q3KNJ2 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nhej1Q3KNJ2 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nhej1Q3KNJ2 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nhej1Q3KNJ2 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nhej1Q3KNJ2 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nhej1Q3KNJ2 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nhej1Q3KNJ2 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nhej1Q3KNJ2 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nhej1Q3KNJ2 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Nhej1Q3KNJ2 Gm11839-201ENSMUST00000120647 1953 ntBASIC16.64■□□□□ 0.25
Nhej1Q3KNJ2 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Nhej1Q3KNJ2 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nhej1Q3KNJ2 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.63■□□□□ 0.25
Nhej1Q3KNJ2 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nhej1Q3KNJ2 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nhej1Q3KNJ2 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC16.63■□□□□ 0.25
Nhej1Q3KNJ2 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nhej1Q3KNJ2 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nhej1Q3KNJ2 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nhej1Q3KNJ2 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nhej1Q3KNJ2 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Nhej1Q3KNJ2 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nhej1Q3KNJ2 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nhej1Q3KNJ2 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nhej1Q3KNJ2 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.63■□□□□ 0.25
Nhej1Q3KNJ2 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.63■□□□□ 0.25
Nhej1Q3KNJ2 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nhej1Q3KNJ2 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.63■□□□□ 0.25
Nhej1Q3KNJ2 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nhej1Q3KNJ2 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Nhej1Q3KNJ2 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.63■□□□□ 0.25
Nhej1Q3KNJ2 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nhej1Q3KNJ2 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nhej1Q3KNJ2 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nhej1Q3KNJ2 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nhej1Q3KNJ2 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nhej1Q3KNJ2 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nhej1Q3KNJ2 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nhej1Q3KNJ2 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
Nhej1Q3KNJ2 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nhej1Q3KNJ2 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nhej1Q3KNJ2 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nhej1Q3KNJ2 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nhej1Q3KNJ2 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nhej1Q3KNJ2 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nhej1Q3KNJ2 AC174678.1-201ENSMUST00000228007 2749 ntBASIC16.62■□□□□ 0.25
Nhej1Q3KNJ2 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nhej1Q3KNJ2 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nhej1Q3KNJ2 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nhej1Q3KNJ2 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Nhej1Q3KNJ2 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nhej1Q3KNJ2 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Nhej1Q3KNJ2 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.62■□□□□ 0.25
Nhej1Q3KNJ2 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.62■□□□□ 0.25
Nhej1Q3KNJ2 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.62■□□□□ 0.25
Nhej1Q3KNJ2 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Nhej1Q3KNJ2 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nhej1Q3KNJ2 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
Nhej1Q3KNJ2 Gm7367-201ENSMUST00000057611 492 ntBASIC16.62■□□□□ 0.25
Nhej1Q3KNJ2 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nhej1Q3KNJ2 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nhej1Q3KNJ2 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nhej1Q3KNJ2 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Nhej1Q3KNJ2 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nhej1Q3KNJ2 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nhej1Q3KNJ2 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nhej1Q3KNJ2 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nhej1Q3KNJ2 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nhej1Q3KNJ2 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Nhej1Q3KNJ2 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Nhej1Q3KNJ2 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nhej1Q3KNJ2 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nhej1Q3KNJ2 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
Nhej1Q3KNJ2 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nhej1Q3KNJ2 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Nhej1Q3KNJ2 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Nhej1Q3KNJ2 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nhej1Q3KNJ2 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nhej1Q3KNJ2 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Nhej1Q3KNJ2 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nhej1Q3KNJ2 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nhej1Q3KNJ2 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nhej1Q3KNJ2 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nhej1Q3KNJ2 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nhej1Q3KNJ2 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nhej1Q3KNJ2 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nhej1Q3KNJ2 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nhej1Q3KNJ2 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nhej1Q3KNJ2 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nhej1Q3KNJ2 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Nhej1Q3KNJ2 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nhej1Q3KNJ2 Gm5587-201ENSMUST00000206270 674 ntBASIC16.61■□□□□ 0.25
Nhej1Q3KNJ2 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.61■□□□□ 0.25
Nhej1Q3KNJ2 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Nhej1Q3KNJ2 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nhej1Q3KNJ2 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nhej1Q3KNJ2 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nhej1Q3KNJ2 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Nhej1Q3KNJ2 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms