Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim63Q38HM4 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trim63Q38HM4 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim63Q38HM4 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trim63Q38HM4 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim63Q38HM4 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Trim63Q38HM4 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim63Q38HM4 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim63Q38HM4 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.92□□□□□ -0.34
Trim63Q38HM4 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim63Q38HM4 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim63Q38HM4 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Trim63Q38HM4 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim63Q38HM4 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim63Q38HM4 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trim63Q38HM4 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim63Q38HM4 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim63Q38HM4 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim63Q38HM4 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.92□□□□□ -0.34
Trim63Q38HM4 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim63Q38HM4 Gm13401-201ENSMUST00000117074 291 ntBASIC12.92□□□□□ -0.34
Trim63Q38HM4 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC12.92□□□□□ -0.34
Trim63Q38HM4 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Trim63Q38HM4 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
Trim63Q38HM4 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC12.92□□□□□ -0.34
Trim63Q38HM4 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim63Q38HM4 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim63Q38HM4 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim63Q38HM4 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim63Q38HM4 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim63Q38HM4 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trim63Q38HM4 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim63Q38HM4 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim63Q38HM4 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim63Q38HM4 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim63Q38HM4 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC12.92□□□□□ -0.34
Trim63Q38HM4 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim63Q38HM4 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim63Q38HM4 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim63Q38HM4 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim63Q38HM4 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim63Q38HM4 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Trim63Q38HM4 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim63Q38HM4 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.91□□□□□ -0.34
Trim63Q38HM4 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Trim63Q38HM4 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC12.91□□□□□ -0.34
Trim63Q38HM4 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim63Q38HM4 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim63Q38HM4 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim63Q38HM4 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim63Q38HM4 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim63Q38HM4 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim63Q38HM4 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim63Q38HM4 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim63Q38HM4 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim63Q38HM4 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trim63Q38HM4 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim63Q38HM4 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim63Q38HM4 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim63Q38HM4 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim63Q38HM4 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim63Q38HM4 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim63Q38HM4 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim63Q38HM4 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim63Q38HM4 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim63Q38HM4 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC12.91□□□□□ -0.34
Trim63Q38HM4 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC12.91□□□□□ -0.34
Trim63Q38HM4 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Trim63Q38HM4 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim63Q38HM4 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim63Q38HM4 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC12.91□□□□□ -0.34
Trim63Q38HM4 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim63Q38HM4 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim63Q38HM4 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim63Q38HM4 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.91□□□□□ -0.34
Trim63Q38HM4 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim63Q38HM4 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim63Q38HM4 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim63Q38HM4 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim63Q38HM4 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trim63Q38HM4 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trim63Q38HM4 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trim63Q38HM4 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim63Q38HM4 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim63Q38HM4 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim63Q38HM4 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim63Q38HM4 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trim63Q38HM4 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim63Q38HM4 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim63Q38HM4 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC12.9□□□□□ -0.34
Trim63Q38HM4 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim63Q38HM4 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC12.9□□□□□ -0.34
Trim63Q38HM4 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim63Q38HM4 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trim63Q38HM4 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim63Q38HM4 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC12.9□□□□□ -0.34
Trim63Q38HM4 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim63Q38HM4 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim63Q38HM4 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim63Q38HM4 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms