Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Thbs3Q05895 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Thbs3Q05895 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Thbs3Q05895 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Thbs3Q05895 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Thbs3Q05895 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Thbs3Q05895 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Thbs3Q05895 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Thbs3Q05895 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Thbs3Q05895 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Thbs3Q05895 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Thbs3Q05895 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Thbs3Q05895 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC13.69□□□□□ -0.22
Thbs3Q05895 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Thbs3Q05895 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Thbs3Q05895 Gm7153-201ENSMUST00000117092 455 ntBASIC13.69□□□□□ -0.22
Thbs3Q05895 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC13.69□□□□□ -0.22
Thbs3Q05895 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC13.69□□□□□ -0.22
Thbs3Q05895 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Thbs3Q05895 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC13.69□□□□□ -0.22
Thbs3Q05895 Gm4535-201ENSMUST00000182274 558 ntBASIC13.69□□□□□ -0.22
Thbs3Q05895 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC13.69□□□□□ -0.22
Thbs3Q05895 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Thbs3Q05895 Gm10355-201ENSMUST00000097146 517 ntBASIC13.69□□□□□ -0.22
Thbs3Q05895 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Thbs3Q05895 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Thbs3Q05895 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Thbs3Q05895 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC13.69□□□□□ -0.22
Thbs3Q05895 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Thbs3Q05895 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC13.69□□□□□ -0.22
Thbs3Q05895 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Thbs3Q05895 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Thbs3Q05895 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Thbs3Q05895 AC133083.1-201ENSMUST00000221736 2209 ntBASIC13.68□□□□□ -0.22
Thbs3Q05895 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC13.68□□□□□ -0.22
Thbs3Q05895 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Thbs3Q05895 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Thbs3Q05895 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Thbs3Q05895 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Thbs3Q05895 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Thbs3Q05895 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Thbs3Q05895 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Thbs3Q05895 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Thbs3Q05895 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Thbs3Q05895 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Thbs3Q05895 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Thbs3Q05895 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC13.68□□□□□ -0.22
Thbs3Q05895 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Thbs3Q05895 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC13.68□□□□□ -0.22
Thbs3Q05895 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Thbs3Q05895 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Thbs3Q05895 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Thbs3Q05895 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Thbs3Q05895 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Thbs3Q05895 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Thbs3Q05895 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Thbs3Q05895 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Thbs3Q05895 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Thbs3Q05895 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Thbs3Q05895 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Thbs3Q05895 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Thbs3Q05895 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Thbs3Q05895 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Thbs3Q05895 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Thbs3Q05895 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Thbs3Q05895 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Thbs3Q05895 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Thbs3Q05895 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Thbs3Q05895 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Thbs3Q05895 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13.67□□□□□ -0.22
Thbs3Q05895 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC13.67□□□□□ -0.22
Thbs3Q05895 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Thbs3Q05895 Gm37584-201ENSMUST00000193595 1290 ntBASIC13.67□□□□□ -0.22
Thbs3Q05895 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Thbs3Q05895 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Thbs3Q05895 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Thbs3Q05895 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC13.67□□□□□ -0.22
Thbs3Q05895 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Thbs3Q05895 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Thbs3Q05895 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Thbs3Q05895 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Thbs3Q05895 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Thbs3Q05895 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Thbs3Q05895 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Thbs3Q05895 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Thbs3Q05895 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Thbs3Q05895 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Thbs3Q05895 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Thbs3Q05895 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Thbs3Q05895 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Thbs3Q05895 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Thbs3Q05895 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Thbs3Q05895 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Thbs3Q05895 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Thbs3Q05895 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Thbs3Q05895 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Thbs3Q05895 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Thbs3Q05895 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Thbs3Q05895 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Thbs3Q05895 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms