Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.07■□□□□ 0.16
Trim43bP86448 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim43bP86448 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim43bP86448 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.07■□□□□ 0.16
Trim43bP86448 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.07■□□□□ 0.16
Trim43bP86448 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim43bP86448 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim43bP86448 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trim43bP86448 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim43bP86448 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim43bP86448 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trim43bP86448 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim43bP86448 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Trim43bP86448 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim43bP86448 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim43bP86448 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim43bP86448 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trim43bP86448 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trim43bP86448 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.06■□□□□ 0.16
Trim43bP86448 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Trim43bP86448 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim43bP86448 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.06■□□□□ 0.16
Trim43bP86448 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim43bP86448 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Trim43bP86448 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Trim43bP86448 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim43bP86448 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.06■□□□□ 0.16
Trim43bP86448 Mir3081-201ENSMUST00000175305 84 ntBASIC16.06■□□□□ 0.16
Trim43bP86448 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.06■□□□□ 0.16
Trim43bP86448 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim43bP86448 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim43bP86448 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.06■□□□□ 0.16
Trim43bP86448 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim43bP86448 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC16.06■□□□□ 0.16
Trim43bP86448 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim43bP86448 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim43bP86448 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
Trim43bP86448 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim43bP86448 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim43bP86448 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.05■□□□□ 0.16
Trim43bP86448 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trim43bP86448 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Trim43bP86448 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim43bP86448 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim43bP86448 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Trim43bP86448 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Trim43bP86448 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim43bP86448 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trim43bP86448 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trim43bP86448 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim43bP86448 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim43bP86448 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trim43bP86448 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trim43bP86448 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim43bP86448 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.05■□□□□ 0.16
Trim43bP86448 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Trim43bP86448 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim43bP86448 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim43bP86448 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trim43bP86448 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim43bP86448 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim43bP86448 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim43bP86448 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim43bP86448 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.04■□□□□ 0.16
Trim43bP86448 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.04■□□□□ 0.16
Trim43bP86448 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.04■□□□□ 0.16
Trim43bP86448 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trim43bP86448 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.04■□□□□ 0.16
Trim43bP86448 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.04■□□□□ 0.16
Trim43bP86448 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trim43bP86448 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.04■□□□□ 0.16
Trim43bP86448 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.04■□□□□ 0.16
Trim43bP86448 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Trim43bP86448 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Trim43bP86448 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim43bP86448 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim43bP86448 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Trim43bP86448 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim43bP86448 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trim43bP86448 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Trim43bP86448 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim43bP86448 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim43bP86448 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trim43bP86448 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim43bP86448 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim43bP86448 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trim43bP86448 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim43bP86448 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim43bP86448 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trim43bP86448 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.03■□□□□ 0.16
Trim43bP86448 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim43bP86448 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim43bP86448 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim43bP86448 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trim43bP86448 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim43bP86448 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim43bP86448 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trim43bP86448 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trim43bP86448 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim43bP86448 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms