Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SgcaP82350 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SgcaP82350 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC13.1□□□□□ -0.31
SgcaP82350 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SgcaP82350 Gm36967-201ENSMUST00000193814 266 ntBASIC13.1□□□□□ -0.31
SgcaP82350 Trmt13-210ENSMUST00000198454 880 ntBASIC13.1□□□□□ -0.31
SgcaP82350 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SgcaP82350 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.1□□□□□ -0.31
SgcaP82350 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
SgcaP82350 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SgcaP82350 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SgcaP82350 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SgcaP82350 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SgcaP82350 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SgcaP82350 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
SgcaP82350 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SgcaP82350 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SgcaP82350 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SgcaP82350 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.1□□□□□ -0.31
SgcaP82350 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
SgcaP82350 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SgcaP82350 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SgcaP82350 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SgcaP82350 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SgcaP82350 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SgcaP82350 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
SgcaP82350 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SgcaP82350 BC037039-201ENSMUST00000192003 2205 ntBASIC13.09□□□□□ -0.31
SgcaP82350 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SgcaP82350 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SgcaP82350 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
SgcaP82350 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SgcaP82350 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SgcaP82350 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SgcaP82350 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SgcaP82350 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SgcaP82350 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SgcaP82350 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SgcaP82350 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SgcaP82350 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
SgcaP82350 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SgcaP82350 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
SgcaP82350 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC13.09□□□□□ -0.31
SgcaP82350 Gm18115-201ENSMUST00000221209 621 ntBASIC13.09□□□□□ -0.31
SgcaP82350 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13.09□□□□□ -0.31
SgcaP82350 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
SgcaP82350 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SgcaP82350 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SgcaP82350 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SgcaP82350 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SgcaP82350 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SgcaP82350 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SgcaP82350 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SgcaP82350 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC13.09□□□□□ -0.31
SgcaP82350 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SgcaP82350 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SgcaP82350 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SgcaP82350 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
SgcaP82350 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
SgcaP82350 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
SgcaP82350 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
SgcaP82350 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.08□□□□□ -0.31
SgcaP82350 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
SgcaP82350 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
SgcaP82350 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
SgcaP82350 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
SgcaP82350 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
SgcaP82350 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SgcaP82350 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SgcaP82350 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SgcaP82350 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
SgcaP82350 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
SgcaP82350 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SgcaP82350 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC13.08□□□□□ -0.32
SgcaP82350 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC13.08□□□□□ -0.32
SgcaP82350 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
SgcaP82350 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SgcaP82350 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.08□□□□□ -0.32
SgcaP82350 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SgcaP82350 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SgcaP82350 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SgcaP82350 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC13.08□□□□□ -0.32
SgcaP82350 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
SgcaP82350 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SgcaP82350 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SgcaP82350 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SgcaP82350 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SgcaP82350 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.07□□□□□ -0.32
SgcaP82350 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
SgcaP82350 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC13.07□□□□□ -0.32
SgcaP82350 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SgcaP82350 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SgcaP82350 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
SgcaP82350 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC13.07□□□□□ -0.32
SgcaP82350 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SgcaP82350 Gm37856-201ENSMUST00000191634 999 ntBASIC13.07□□□□□ -0.32
SgcaP82350 Gm44878-201ENSMUST00000205812 1295 ntBASIC13.07□□□□□ -0.32
SgcaP82350 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
SgcaP82350 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
SgcaP82350 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms