Protein–RNA interactions for Protein: P62046

Lrch1, Leucine-rich repeat and calponin homology domain-containing protein 1, mousemouse

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrch1P62046 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lrch1P62046 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lrch1P62046 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lrch1P62046 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC18.32■□□□□ 0.52
Lrch1P62046 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Lrch1P62046 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Lrch1P62046 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lrch1P62046 Gm7286-201ENSMUST00000182691 1007 ntBASIC18.32■□□□□ 0.52
Lrch1P62046 Rbfox2-208ENSMUST00000227930 1218 ntBASIC18.32■□□□□ 0.52
Lrch1P62046 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lrch1P62046 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
Lrch1P62046 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Lrch1P62046 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lrch1P62046 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lrch1P62046 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lrch1P62046 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Lrch1P62046 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lrch1P62046 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lrch1P62046 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Lrch1P62046 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lrch1P62046 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.31■□□□□ 0.52
Lrch1P62046 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC18.31■□□□□ 0.52
Lrch1P62046 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lrch1P62046 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Lrch1P62046 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lrch1P62046 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Lrch1P62046 Gm2810-201ENSMUST00000118681 990 ntBASIC18.31■□□□□ 0.52
Lrch1P62046 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Lrch1P62046 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC18.31■□□□□ 0.52
Lrch1P62046 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lrch1P62046 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lrch1P62046 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC18.31■□□□□ 0.52
Lrch1P62046 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lrch1P62046 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lrch1P62046 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lrch1P62046 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lrch1P62046 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lrch1P62046 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC18.3■□□□□ 0.52
Lrch1P62046 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lrch1P62046 Gm7488-201ENSMUST00000117148 684 ntBASIC18.3■□□□□ 0.52
Lrch1P62046 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC18.3■□□□□ 0.52
Lrch1P62046 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Lrch1P62046 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lrch1P62046 Gm7730-201ENSMUST00000212486 454 ntBASIC18.3■□□□□ 0.52
Lrch1P62046 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lrch1P62046 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lrch1P62046 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Lrch1P62046 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lrch1P62046 Gm13517-201ENSMUST00000120782 1495 ntBASIC18.3■□□□□ 0.52
Lrch1P62046 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lrch1P62046 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC18.3■□□□□ 0.52
Lrch1P62046 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC18.3■□□□□ 0.52
Lrch1P62046 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Lrch1P62046 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Lrch1P62046 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.3■□□□□ 0.52
Lrch1P62046 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC18.3■□□□□ 0.52
Lrch1P62046 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lrch1P62046 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Lrch1P62046 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lrch1P62046 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lrch1P62046 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Lrch1P62046 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lrch1P62046 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC18.3■□□□□ 0.52
Lrch1P62046 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lrch1P62046 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lrch1P62046 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC18.29■□□□□ 0.52
Lrch1P62046 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lrch1P62046 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Lrch1P62046 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Lrch1P62046 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lrch1P62046 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Lrch1P62046 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lrch1P62046 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lrch1P62046 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lrch1P62046 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC18.29■□□□□ 0.52
Lrch1P62046 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Lrch1P62046 Gm18737-201ENSMUST00000173594 937 ntBASIC18.29■□□□□ 0.52
Lrch1P62046 Gm9824-201ENSMUST00000178707 561 ntBASIC18.29■□□□□ 0.52
Lrch1P62046 Gm7653-201ENSMUST00000214567 508 ntBASIC18.29■□□□□ 0.52
Lrch1P62046 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lrch1P62046 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lrch1P62046 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lrch1P62046 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.29■□□□□ 0.52
Lrch1P62046 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Lrch1P62046 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lrch1P62046 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lrch1P62046 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Lrch1P62046 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lrch1P62046 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Lrch1P62046 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lrch1P62046 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Lrch1P62046 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Lrch1P62046 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Lrch1P62046 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Lrch1P62046 Gm6888-201ENSMUST00000221983 706 ntBASIC18.28■□□□□ 0.52
Lrch1P62046 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Lrch1P62046 AC124751.1-201ENSMUST00000222716 1408 ntBASIC18.28■□□□□ 0.52
Lrch1P62046 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lrch1P62046 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lrch1P62046 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms