Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Gm25086-201ENSMUST00000179931 110 ntBASIC21■□□□□ 0.95
Nphp4P59240 Gm23243-201ENSMUST00000180047 110 ntBASIC21■□□□□ 0.95
Nphp4P59240 Gm24659-201ENSMUST00000180212 110 ntBASIC21■□□□□ 0.95
Nphp4P59240 Gm24169-201ENSMUST00000180244 110 ntBASIC21■□□□□ 0.95
Nphp4P59240 Gm23689-201ENSMUST00000180354 110 ntBASIC21■□□□□ 0.95
Nphp4P59240 Gm27359-201ENSMUST00000184153 110 ntBASIC21■□□□□ 0.95
Nphp4P59240 Gm27785-201ENSMUST00000184268 110 ntBASIC21■□□□□ 0.95
Nphp4P59240 Gm27466-201ENSMUST00000184396 110 ntBASIC21■□□□□ 0.95
Nphp4P59240 Gm27703-201ENSMUST00000184836 110 ntBASIC21■□□□□ 0.95
Nphp4P59240 AC166341.4-201ENSMUST00000220625 123 ntBASIC21■□□□□ 0.95
Nphp4P59240 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nphp4P59240 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC21■□□□□ 0.95
Nphp4P59240 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC21■□□□□ 0.95
Nphp4P59240 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC21■□□□□ 0.95
Nphp4P59240 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nphp4P59240 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
Nphp4P59240 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Nphp4P59240 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Nphp4P59240 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Nphp4P59240 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC21■□□□□ 0.95
Nphp4P59240 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nphp4P59240 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Nphp4P59240 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC20.99■□□□□ 0.95
Nphp4P59240 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nphp4P59240 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC20.99■□□□□ 0.95
Nphp4P59240 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC20.99■□□□□ 0.95
Nphp4P59240 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC20.99■□□□□ 0.95
Nphp4P59240 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nphp4P59240 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC20.99■□□□□ 0.95
Nphp4P59240 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nphp4P59240 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nphp4P59240 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC20.99■□□□□ 0.95
Nphp4P59240 Gm18057-201ENSMUST00000208220 503 ntBASIC20.99■□□□□ 0.95
Nphp4P59240 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
Nphp4P59240 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nphp4P59240 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nphp4P59240 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC20.99■□□□□ 0.95
Nphp4P59240 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Nphp4P59240 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nphp4P59240 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nphp4P59240 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nphp4P59240 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nphp4P59240 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Nphp4P59240 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nphp4P59240 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nphp4P59240 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nphp4P59240 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nphp4P59240 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nphp4P59240 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC20.98■□□□□ 0.95
Nphp4P59240 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC20.98■□□□□ 0.95
Nphp4P59240 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC20.98■□□□□ 0.95
Nphp4P59240 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Nphp4P59240 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC20.98■□□□□ 0.95
Nphp4P59240 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nphp4P59240 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nphp4P59240 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nphp4P59240 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nphp4P59240 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nphp4P59240 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nphp4P59240 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nphp4P59240 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nphp4P59240 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Nphp4P59240 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nphp4P59240 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nphp4P59240 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Nphp4P59240 Gm25287-201ENSMUST00000103846 110 ntBASIC20.97■□□□□ 0.95
Nphp4P59240 Gm22918-201ENSMUST00000103855 110 ntBASIC20.97■□□□□ 0.95
Nphp4P59240 Gm6973-201ENSMUST00000117080 721 ntBASIC20.97■□□□□ 0.95
Nphp4P59240 Gm16026-204ENSMUST00000162652 683 ntBASIC20.97■□□□□ 0.95
Nphp4P59240 AC164567.1-201ENSMUST00000219185 960 ntBASIC20.97■□□□□ 0.95
Nphp4P59240 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC20.97■□□□□ 0.95
Nphp4P59240 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nphp4P59240 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC20.97■□□□□ 0.95
Nphp4P59240 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Nphp4P59240 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nphp4P59240 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nphp4P59240 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nphp4P59240 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nphp4P59240 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nphp4P59240 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Nphp4P59240 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Nphp4P59240 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
Nphp4P59240 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nphp4P59240 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Nphp4P59240 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC20.96■□□□□ 0.95
Nphp4P59240 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nphp4P59240 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nphp4P59240 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nphp4P59240 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nphp4P59240 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC20.96■□□□□ 0.95
Nphp4P59240 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nphp4P59240 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nphp4P59240 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nphp4P59240 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nphp4P59240 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC20.95■□□□□ 0.95
Nphp4P59240 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
Nphp4P59240 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Nphp4P59240 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC20.95■□□□□ 0.95
Nphp4P59240 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Nphp4P59240 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 10.6 ms