Protein–RNA interactions for Protein: P56371

Rab4a, Ras-related protein Rab-4A, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab4aP56371 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rab4aP56371 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rab4aP56371 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rab4aP56371 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Rab4aP56371 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rab4aP56371 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rab4aP56371 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rab4aP56371 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rab4aP56371 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rab4aP56371 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC12.34□□□□□ -0.43
Rab4aP56371 Gm2011-201ENSMUST00000203124 1263 ntBASIC12.34□□□□□ -0.43
Rab4aP56371 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC12.34□□□□□ -0.43
Rab4aP56371 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC12.34□□□□□ -0.43
Rab4aP56371 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rab4aP56371 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rab4aP56371 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rab4aP56371 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rab4aP56371 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rab4aP56371 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rab4aP56371 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rab4aP56371 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Rab4aP56371 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rab4aP56371 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rab4aP56371 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rab4aP56371 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rab4aP56371 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rab4aP56371 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rab4aP56371 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Rab4aP56371 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Rab4aP56371 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Rab4aP56371 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.34□□□□□ -0.43
Rab4aP56371 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rab4aP56371 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rab4aP56371 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rab4aP56371 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rab4aP56371 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.43
Rab4aP56371 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Rab4aP56371 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Rab4aP56371 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Rab4aP56371 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
Rab4aP56371 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Rab4aP56371 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rab4aP56371 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rab4aP56371 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Rab4aP56371 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rab4aP56371 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rab4aP56371 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.33□□□□□ -0.44
Rab4aP56371 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC12.33□□□□□ -0.44
Rab4aP56371 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rab4aP56371 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rab4aP56371 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Rab4aP56371 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Rab4aP56371 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Rab4aP56371 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Rab4aP56371 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC12.33□□□□□ -0.44
Rab4aP56371 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Rab4aP56371 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rab4aP56371 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rab4aP56371 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rab4aP56371 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rab4aP56371 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rab4aP56371 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rab4aP56371 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Rab4aP56371 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rab4aP56371 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rab4aP56371 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rab4aP56371 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rab4aP56371 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rab4aP56371 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rab4aP56371 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rab4aP56371 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rab4aP56371 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rab4aP56371 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rab4aP56371 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rab4aP56371 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rab4aP56371 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rab4aP56371 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Rab4aP56371 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rab4aP56371 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rab4aP56371 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rab4aP56371 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rab4aP56371 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rab4aP56371 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rab4aP56371 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rab4aP56371 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
Rab4aP56371 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rab4aP56371 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Rab4aP56371 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rab4aP56371 Gm7291-201ENSMUST00000199147 382 ntBASIC12.32□□□□□ -0.44
Rab4aP56371 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC12.32□□□□□ -0.44
Rab4aP56371 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rab4aP56371 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Rab4aP56371 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rab4aP56371 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.32□□□□□ -0.44
Rab4aP56371 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rab4aP56371 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rab4aP56371 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rab4aP56371 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rab4aP56371 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Rab4aP56371 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms