Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NcanP55066 Gm11543-201ENSMUST00000120758 370 ntBASIC16.34■□□□□ 0.21
NcanP55066 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NcanP55066 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NcanP55066 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NcanP55066 Gm8116-201ENSMUST00000182917 1201 ntBASIC16.34■□□□□ 0.21
NcanP55066 Gm8515-201ENSMUST00000194852 576 ntBASIC16.34■□□□□ 0.21
NcanP55066 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
NcanP55066 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
NcanP55066 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NcanP55066 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NcanP55066 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NcanP55066 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
NcanP55066 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NcanP55066 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NcanP55066 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NcanP55066 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
NcanP55066 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NcanP55066 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NcanP55066 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
NcanP55066 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
NcanP55066 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NcanP55066 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NcanP55066 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NcanP55066 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.33■□□□□ 0.21
NcanP55066 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
NcanP55066 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
NcanP55066 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NcanP55066 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC16.33■□□□□ 0.2
NcanP55066 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NcanP55066 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NcanP55066 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
NcanP55066 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC16.33■□□□□ 0.2
NcanP55066 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC16.33■□□□□ 0.2
NcanP55066 Gm45059-201ENSMUST00000205558 1077 ntBASIC16.33■□□□□ 0.2
NcanP55066 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC16.33■□□□□ 0.2
NcanP55066 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC16.33■□□□□ 0.2
NcanP55066 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC16.33■□□□□ 0.2
NcanP55066 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NcanP55066 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NcanP55066 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NcanP55066 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
NcanP55066 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
NcanP55066 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.33■□□□□ 0.2
NcanP55066 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
NcanP55066 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.33■□□□□ 0.2
NcanP55066 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NcanP55066 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NcanP55066 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NcanP55066 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NcanP55066 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NcanP55066 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NcanP55066 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
NcanP55066 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NcanP55066 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NcanP55066 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NcanP55066 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NcanP55066 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.32■□□□□ 0.2
NcanP55066 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NcanP55066 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
NcanP55066 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NcanP55066 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NcanP55066 Gm27680-201ENSMUST00000184192 160 ntBASIC16.32■□□□□ 0.2
NcanP55066 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NcanP55066 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NcanP55066 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC16.32■□□□□ 0.2
NcanP55066 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NcanP55066 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NcanP55066 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NcanP55066 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NcanP55066 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NcanP55066 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NcanP55066 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
NcanP55066 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NcanP55066 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NcanP55066 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NcanP55066 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.32■□□□□ 0.2
NcanP55066 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NcanP55066 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NcanP55066 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NcanP55066 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NcanP55066 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NcanP55066 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NcanP55066 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NcanP55066 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC16.31■□□□□ 0.2
NcanP55066 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NcanP55066 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC16.31■□□□□ 0.2
NcanP55066 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NcanP55066 Gm27533-201ENSMUST00000183800 152 ntBASIC16.31■□□□□ 0.2
NcanP55066 Gm44344-201ENSMUST00000200287 129 ntBASIC16.31■□□□□ 0.2
NcanP55066 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC16.31■□□□□ 0.2
NcanP55066 AC154171.1-201ENSMUST00000224610 643 ntBASIC16.31■□□□□ 0.2
NcanP55066 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NcanP55066 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
NcanP55066 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NcanP55066 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NcanP55066 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NcanP55066 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NcanP55066 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NcanP55066 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms