Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox3P53784 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox3P53784 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox3P53784 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.95□□□□□ -0.02
Sox3P53784 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox3P53784 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Sox3P53784 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox3P53784 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Sox3P53784 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox3P53784 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Sox3P53784 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Sox3P53784 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox3P53784 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Sox3P53784 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sox3P53784 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.94□□□□□ -0.02
Sox3P53784 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.94□□□□□ -0.02
Sox3P53784 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sox3P53784 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sox3P53784 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sox3P53784 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Sox3P53784 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sox3P53784 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sox3P53784 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC14.94□□□□□ -0.02
Sox3P53784 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.94□□□□□ -0.02
Sox3P53784 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.94□□□□□ -0.02
Sox3P53784 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sox3P53784 Gm13036-201ENSMUST00000117799 748 ntBASIC14.94□□□□□ -0.02
Sox3P53784 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.94□□□□□ -0.02
Sox3P53784 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC14.94□□□□□ -0.02
Sox3P53784 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Sox3P53784 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sox3P53784 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.94□□□□□ -0.02
Sox3P53784 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sox3P53784 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Sox3P53784 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sox3P53784 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sox3P53784 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sox3P53784 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Sox3P53784 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox3P53784 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox3P53784 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Sox3P53784 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Sox3P53784 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox3P53784 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox3P53784 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox3P53784 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox3P53784 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Sox3P53784 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox3P53784 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox3P53784 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox3P53784 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox3P53784 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
Sox3P53784 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.93□□□□□ -0.02
Sox3P53784 Gm6550-201ENSMUST00000187574 993 ntBASIC14.93□□□□□ -0.02
Sox3P53784 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC14.93□□□□□ -0.02
Sox3P53784 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Sox3P53784 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox3P53784 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox3P53784 Gm44872-201ENSMUST00000207864 420 ntBASIC14.93□□□□□ -0.02
Sox3P53784 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.93□□□□□ -0.02
Sox3P53784 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Sox3P53784 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Sox3P53784 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Sox3P53784 Gm13127-201ENSMUST00000118978 1389 ntBASIC14.93□□□□□ -0.02
Sox3P53784 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox3P53784 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox3P53784 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Sox3P53784 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox3P53784 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Sox3P53784 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox3P53784 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox3P53784 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14.93□□□□□ -0.02
Sox3P53784 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox3P53784 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox3P53784 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox3P53784 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Sox3P53784 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox3P53784 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Sox3P53784 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.93□□□□□ -0.02
Sox3P53784 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox3P53784 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox3P53784 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Sox3P53784 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.92□□□□□ -0.02
Sox3P53784 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.92□□□□□ -0.02
Sox3P53784 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox3P53784 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox3P53784 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox3P53784 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
Sox3P53784 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.92□□□□□ -0.02
Sox3P53784 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.92□□□□□ -0.02
Sox3P53784 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC14.92□□□□□ -0.02
Sox3P53784 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.92□□□□□ -0.02
Sox3P53784 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox3P53784 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox3P53784 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Sox3P53784 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Sox3P53784 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox3P53784 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox3P53784 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Sox3P53784 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms