Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Lbx1P52955 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Lbx1P52955 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Lbx1P52955 Gm29361-201ENSMUST00000183323 2000 ntBASIC15.04■□□□□ -0
Lbx1P52955 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Lbx1P52955 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Lbx1P52955 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Lbx1P52955 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Lbx1P52955 AC119177.1-201ENSMUST00000227647 1332 ntBASIC15.04■□□□□ -0
Lbx1P52955 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Lbx1P52955 Gm11918-201ENSMUST00000121660 179 ntBASIC15.04■□□□□ -0
Lbx1P52955 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Lbx1P52955 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC15.04■□□□□ -0
Lbx1P52955 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC15.04■□□□□ -0
Lbx1P52955 Gm24694-201ENSMUST00000180054 110 ntBASIC15.04■□□□□ -0
Lbx1P52955 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC15.04■□□□□ -0
Lbx1P52955 Gm27663-201ENSMUST00000184839 110 ntBASIC15.04■□□□□ -0
Lbx1P52955 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC15.04■□□□□ -0
Lbx1P52955 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Lbx1P52955 AC159896.2-201ENSMUST00000214753 269 ntBASIC15.04■□□□□ -0
Lbx1P52955 AC154319.1-201ENSMUST00000216330 312 ntBASIC15.04■□□□□ -0
Lbx1P52955 AL589735.1-201ENSMUST00000224353 270 ntBASIC15.04■□□□□ -0
Lbx1P52955 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Lbx1P52955 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Lbx1P52955 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Lbx1P52955 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Lbx1P52955 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.04■□□□□ -0
Lbx1P52955 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Lbx1P52955 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Lbx1P52955 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Lbx1P52955 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Lbx1P52955 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Lbx1P52955 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Lbx1P52955 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC15.03■□□□□ -0
Lbx1P52955 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Lbx1P52955 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Lbx1P52955 Gm4984-201ENSMUST00000115987 360 ntBASIC15.03■□□□□ -0
Lbx1P52955 Gm16198-201ENSMUST00000118766 670 ntBASIC15.03■□□□□ -0
Lbx1P52955 Gm6539-201ENSMUST00000119157 1064 ntBASIC15.03■□□□□ -0
Lbx1P52955 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC15.03■□□□□ -0
Lbx1P52955 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Lbx1P52955 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Lbx1P52955 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC15.03■□□□□ -0
Lbx1P52955 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC15.03■□□□□ -0
Lbx1P52955 Gm7775-201ENSMUST00000218871 853 ntBASIC15.03■□□□□ -0
Lbx1P52955 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC15.03■□□□□ -0
Lbx1P52955 AC166341.4-201ENSMUST00000220625 123 ntBASIC15.03■□□□□ -0
Lbx1P52955 CT009713.10-202ENSMUST00000225734 696 ntBASIC15.03■□□□□ -0
Lbx1P52955 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Lbx1P52955 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.03■□□□□ -0
Lbx1P52955 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Lbx1P52955 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Lbx1P52955 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Lbx1P52955 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Lbx1P52955 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Lbx1P52955 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Lbx1P52955 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Lbx1P52955 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Lbx1P52955 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Lbx1P52955 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Lbx1P52955 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Lbx1P52955 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Lbx1P52955 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Lbx1P52955 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Lbx1P52955 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Lbx1P52955 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC15.03■□□□□ -0
Lbx1P52955 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC15.02■□□□□ -0
Lbx1P52955 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Lbx1P52955 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Lbx1P52955 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Lbx1P52955 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC15.02■□□□□ -0
Lbx1P52955 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Lbx1P52955 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC15.02■□□□□ -0
Lbx1P52955 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
Lbx1P52955 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Lbx1P52955 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Lbx1P52955 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Lbx1P52955 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC15.02■□□□□ -0
Lbx1P52955 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC15.02■□□□□ -0
Lbx1P52955 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Lbx1P52955 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
Lbx1P52955 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC15.02■□□□□ -0
Lbx1P52955 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC15.02■□□□□ -0
Lbx1P52955 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC15.02■□□□□ -0
Lbx1P52955 CT030684.1-201ENSMUST00000227292 914 ntBASIC15.02■□□□□ -0
Lbx1P52955 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Lbx1P52955 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Lbx1P52955 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Lbx1P52955 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
Lbx1P52955 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Lbx1P52955 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Lbx1P52955 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Lbx1P52955 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC15.02□□□□□ -0.01
Lbx1P52955 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Lbx1P52955 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Lbx1P52955 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Lbx1P52955 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lbx1P52955 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC15.01□□□□□ -0.01
Lbx1P52955 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lbx1P52955 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms