Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Gm42670-201ENSMUST00000201816 1292 ntBASIC15.78■□□□□ 0.12
Lhx3P50481 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC15.78■□□□□ 0.12
Lhx3P50481 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC15.78■□□□□ 0.12
Lhx3P50481 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lhx3P50481 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Lhx3P50481 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lhx3P50481 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.78■□□□□ 0.12
Lhx3P50481 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Lhx3P50481 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lhx3P50481 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lhx3P50481 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Lhx3P50481 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lhx3P50481 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lhx3P50481 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.78■□□□□ 0.12
Lhx3P50481 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lhx3P50481 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lhx3P50481 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Lhx3P50481 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.78■□□□□ 0.12
Lhx3P50481 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Lhx3P50481 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lhx3P50481 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Lhx3P50481 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Lhx3P50481 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Lhx3P50481 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Lhx3P50481 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Lhx3P50481 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Lhx3P50481 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Lhx3P50481 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Lhx3P50481 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC15.77■□□□□ 0.12
Lhx3P50481 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC15.77■□□□□ 0.12
Lhx3P50481 Gm18206-201ENSMUST00000207027 926 ntBASIC15.77■□□□□ 0.12
Lhx3P50481 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC15.77■□□□□ 0.12
Lhx3P50481 Psmb5-202ENSMUST00000227257 622 ntBASIC15.77■□□□□ 0.12
Lhx3P50481 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Lhx3P50481 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Lhx3P50481 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Lhx3P50481 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Lhx3P50481 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Lhx3P50481 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lhx3P50481 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lhx3P50481 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.76■□□□□ 0.11
Lhx3P50481 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lhx3P50481 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lhx3P50481 Best4-ps-201ENSMUST00000129783 1380 ntBASIC15.76■□□□□ 0.11
Lhx3P50481 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lhx3P50481 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Lhx3P50481 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lhx3P50481 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lhx3P50481 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Lhx3P50481 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lhx3P50481 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Lhx3P50481 Gm6443-201ENSMUST00000203599 874 ntBASIC15.76■□□□□ 0.11
Lhx3P50481 Gm5364-201ENSMUST00000216789 889 ntBASIC15.76■□□□□ 0.11
Lhx3P50481 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lhx3P50481 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lhx3P50481 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Lhx3P50481 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.76■□□□□ 0.11
Lhx3P50481 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.76■□□□□ 0.11
Lhx3P50481 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lhx3P50481 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Lhx3P50481 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lhx3P50481 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.75■□□□□ 0.11
Lhx3P50481 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.75■□□□□ 0.11
Lhx3P50481 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lhx3P50481 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lhx3P50481 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lhx3P50481 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lhx3P50481 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lhx3P50481 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Lhx3P50481 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.75■□□□□ 0.11
Lhx3P50481 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lhx3P50481 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC15.75■□□□□ 0.11
Lhx3P50481 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC15.75■□□□□ 0.11
Lhx3P50481 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Lhx3P50481 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Lhx3P50481 Gm43935-201ENSMUST00000203569 1050 ntBASIC15.75■□□□□ 0.11
Lhx3P50481 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC15.75■□□□□ 0.11
Lhx3P50481 Gm7787-201ENSMUST00000216858 688 ntBASIC15.75■□□□□ 0.11
Lhx3P50481 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Lhx3P50481 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lhx3P50481 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lhx3P50481 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lhx3P50481 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Lhx3P50481 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lhx3P50481 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC15.75■□□□□ 0.11
Lhx3P50481 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lhx3P50481 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Lhx3P50481 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.75■□□□□ 0.11
Lhx3P50481 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lhx3P50481 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lhx3P50481 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Lhx3P50481 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lhx3P50481 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lhx3P50481 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lhx3P50481 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lhx3P50481 AC122901.1-201ENSMUST00000214203 1790 ntBASIC15.75■□□□□ 0.11
Lhx3P50481 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Lhx3P50481 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Lhx3P50481 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.74■□□□□ 0.11
Lhx3P50481 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms