Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Shmt1P50431 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Shmt1P50431 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Shmt1P50431 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Shmt1P50431 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Shmt1P50431 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Shmt1P50431 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
Shmt1P50431 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Shmt1P50431 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC16.47■□□□□ 0.23
Shmt1P50431 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Shmt1P50431 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
Shmt1P50431 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Shmt1P50431 AC154222.1-201ENSMUST00000223882 475 ntBASIC16.47■□□□□ 0.23
Shmt1P50431 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Shmt1P50431 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Shmt1P50431 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Shmt1P50431 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Shmt1P50431 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC16.47■□□□□ 0.23
Shmt1P50431 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Shmt1P50431 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Shmt1P50431 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Shmt1P50431 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Shmt1P50431 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Shmt1P50431 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Shmt1P50431 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Shmt1P50431 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Shmt1P50431 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC16.46■□□□□ 0.23
Shmt1P50431 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Shmt1P50431 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16.46■□□□□ 0.23
Shmt1P50431 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC16.46■□□□□ 0.23
Shmt1P50431 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC16.46■□□□□ 0.23
Shmt1P50431 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC16.46■□□□□ 0.23
Shmt1P50431 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Shmt1P50431 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.46■□□□□ 0.23
Shmt1P50431 Gm45167-201ENSMUST00000208007 322 ntBASIC16.46■□□□□ 0.23
Shmt1P50431 AC159093.1-201ENSMUST00000227779 380 ntBASIC16.46■□□□□ 0.23
Shmt1P50431 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Shmt1P50431 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Shmt1P50431 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.46■□□□□ 0.23
Shmt1P50431 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Shmt1P50431 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Shmt1P50431 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Shmt1P50431 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Shmt1P50431 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Shmt1P50431 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Shmt1P50431 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Shmt1P50431 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Shmt1P50431 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.46■□□□□ 0.22
Shmt1P50431 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Shmt1P50431 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shmt1P50431 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Shmt1P50431 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shmt1P50431 Dancr-204ENSMUST00000132389 2347 ntBASIC16.45■□□□□ 0.22
Shmt1P50431 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shmt1P50431 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC16.45■□□□□ 0.22
Shmt1P50431 Gm37153-201ENSMUST00000193637 231 ntBASIC16.45■□□□□ 0.22
Shmt1P50431 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shmt1P50431 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shmt1P50431 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shmt1P50431 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Shmt1P50431 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shmt1P50431 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Shmt1P50431 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Shmt1P50431 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.45■□□□□ 0.22
Shmt1P50431 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shmt1P50431 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shmt1P50431 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shmt1P50431 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shmt1P50431 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shmt1P50431 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.44■□□□□ 0.22
Shmt1P50431 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shmt1P50431 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
Shmt1P50431 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC16.44■□□□□ 0.22
Shmt1P50431 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shmt1P50431 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.44■□□□□ 0.22
Shmt1P50431 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shmt1P50431 Gm11764-201ENSMUST00000120221 623 ntBASIC16.44■□□□□ 0.22
Shmt1P50431 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC16.44■□□□□ 0.22
Shmt1P50431 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC16.44■□□□□ 0.22
Shmt1P50431 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC16.44■□□□□ 0.22
Shmt1P50431 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC16.44■□□□□ 0.22
Shmt1P50431 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shmt1P50431 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shmt1P50431 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Shmt1P50431 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Shmt1P50431 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shmt1P50431 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Shmt1P50431 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shmt1P50431 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shmt1P50431 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.44■□□□□ 0.22
Shmt1P50431 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shmt1P50431 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shmt1P50431 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Shmt1P50431 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shmt1P50431 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shmt1P50431 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Shmt1P50431 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Shmt1P50431 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Shmt1P50431 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.43■□□□□ 0.22
Shmt1P50431 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms