Protein–RNA interactions for Protein: P50228

Cxcl5, C-X-C motif chemokine 5, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl5P50228 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cxcl5P50228 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cxcl5P50228 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cxcl5P50228 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cxcl5P50228 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cxcl5P50228 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cxcl5P50228 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Cxcl5P50228 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Cxcl5P50228 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cxcl5P50228 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cxcl5P50228 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cxcl5P50228 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cxcl5P50228 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Cxcl5P50228 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cxcl5P50228 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC13.62□□□□□ -0.23
Cxcl5P50228 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC13.62□□□□□ -0.23
Cxcl5P50228 Gm11336-201ENSMUST00000118168 334 ntBASIC13.62□□□□□ -0.23
Cxcl5P50228 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cxcl5P50228 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Cxcl5P50228 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cxcl5P50228 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Cxcl5P50228 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cxcl5P50228 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cxcl5P50228 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Cxcl5P50228 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cxcl5P50228 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Cxcl5P50228 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC13.62□□□□□ -0.23
Cxcl5P50228 AC122901.1-201ENSMUST00000214203 1790 ntBASIC13.62□□□□□ -0.23
Cxcl5P50228 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC13.62□□□□□ -0.23
Cxcl5P50228 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.62□□□□□ -0.23
Cxcl5P50228 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cxcl5P50228 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Cxcl5P50228 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cxcl5P50228 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cxcl5P50228 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cxcl5P50228 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC13.62□□□□□ -0.23
Cxcl5P50228 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Cxcl5P50228 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC13.62□□□□□ -0.23
Cxcl5P50228 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cxcl5P50228 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cxcl5P50228 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Cxcl5P50228 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cxcl5P50228 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Cxcl5P50228 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cxcl5P50228 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cxcl5P50228 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.61□□□□□ -0.23
Cxcl5P50228 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cxcl5P50228 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Cxcl5P50228 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.61□□□□□ -0.23
Cxcl5P50228 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cxcl5P50228 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cxcl5P50228 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
Cxcl5P50228 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cxcl5P50228 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cxcl5P50228 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Cxcl5P50228 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cxcl5P50228 Krtap5-1-202ENSMUST00000188274 742 ntBASIC13.61□□□□□ -0.23
Cxcl5P50228 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC13.61□□□□□ -0.23
Cxcl5P50228 AC122351.1-201ENSMUST00000220467 126 ntBASIC13.61□□□□□ -0.23
Cxcl5P50228 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cxcl5P50228 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cxcl5P50228 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cxcl5P50228 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cxcl5P50228 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cxcl5P50228 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cxcl5P50228 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cxcl5P50228 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Cxcl5P50228 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Cxcl5P50228 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cxcl5P50228 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cxcl5P50228 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cxcl5P50228 Zfp264-201ENSMUST00000208656 1563 ntBASIC13.61□□□□□ -0.23
Cxcl5P50228 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Cxcl5P50228 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cxcl5P50228 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cxcl5P50228 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cxcl5P50228 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cxcl5P50228 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cxcl5P50228 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.61□□□□□ -0.23
Cxcl5P50228 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cxcl5P50228 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cxcl5P50228 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.61□□□□□ -0.23
Cxcl5P50228 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC13.61□□□□□ -0.23
Cxcl5P50228 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cxcl5P50228 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cxcl5P50228 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cxcl5P50228 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cxcl5P50228 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cxcl5P50228 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cxcl5P50228 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Cxcl5P50228 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cxcl5P50228 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cxcl5P50228 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cxcl5P50228 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cxcl5P50228 Gm42901-201ENSMUST00000197735 3171 ntBASIC13.6□□□□□ -0.23
Cxcl5P50228 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cxcl5P50228 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cxcl5P50228 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cxcl5P50228 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cxcl5P50228 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms