Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Nkx2-1P50220 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Nkx2-1P50220 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Nkx2-1P50220 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx2-1P50220 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx2-1P50220 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx2-1P50220 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx2-1P50220 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx2-1P50220 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx2-1P50220 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx2-1P50220 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC12.96□□□□□ -0.33
Nkx2-1P50220 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Nkx2-1P50220 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx2-1P50220 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx2-1P50220 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx2-1P50220 Gm11539-201ENSMUST00000119837 557 ntBASIC12.96□□□□□ -0.33
Nkx2-1P50220 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC12.96□□□□□ -0.33
Nkx2-1P50220 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC12.96□□□□□ -0.33
Nkx2-1P50220 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Nkx2-1P50220 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Nkx2-1P50220 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx2-1P50220 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx2-1P50220 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx2-1P50220 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC12.96□□□□□ -0.33
Nkx2-1P50220 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx2-1P50220 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.33
Nkx2-1P50220 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx2-1P50220 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx2-1P50220 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nkx2-1P50220 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC12.96□□□□□ -0.34
Nkx2-1P50220 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nkx2-1P50220 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nkx2-1P50220 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nkx2-1P50220 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nkx2-1P50220 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nkx2-1P50220 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nkx2-1P50220 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nkx2-1P50220 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nkx2-1P50220 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Nkx2-1P50220 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Nkx2-1P50220 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nkx2-1P50220 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Nkx2-1P50220 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-1P50220 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-1P50220 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-1P50220 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-1P50220 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-1P50220 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-1P50220 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-1P50220 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Nkx2-1P50220 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-1P50220 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Nkx2-1P50220 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Nkx2-1P50220 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-1P50220 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-1P50220 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC12.95□□□□□ -0.34
Nkx2-1P50220 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-1P50220 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-1P50220 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Nkx2-1P50220 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Nkx2-1P50220 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Nkx2-1P50220 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-1P50220 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC12.95□□□□□ -0.34
Nkx2-1P50220 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-1P50220 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-1P50220 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-1P50220 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-1P50220 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-1P50220 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-1P50220 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.95□□□□□ -0.34
Nkx2-1P50220 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-1P50220 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-1P50220 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Nkx2-1P50220 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-1P50220 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12.94□□□□□ -0.34
Nkx2-1P50220 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC12.94□□□□□ -0.34
Nkx2-1P50220 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-1P50220 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-1P50220 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Nkx2-1P50220 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-1P50220 Gm15442-201ENSMUST00000117905 1527 ntBASIC12.94□□□□□ -0.34
Nkx2-1P50220 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-1P50220 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-1P50220 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-1P50220 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-1P50220 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-1P50220 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Nkx2-1P50220 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC12.94□□□□□ -0.34
Nkx2-1P50220 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC12.94□□□□□ -0.34
Nkx2-1P50220 Gm29707-201ENSMUST00000196325 491 ntBASIC12.94□□□□□ -0.34
Nkx2-1P50220 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC12.94□□□□□ -0.34
Nkx2-1P50220 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-1P50220 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Nkx2-1P50220 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-1P50220 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-1P50220 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-1P50220 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-1P50220 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-1P50220 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-1P50220 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms