Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Brca1P48754 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Brca1P48754 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC17.34■□□□□ 0.37
Brca1P48754 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Brca1P48754 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC17.34■□□□□ 0.37
Brca1P48754 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Brca1P48754 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.34■□□□□ 0.37
Brca1P48754 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Brca1P48754 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Brca1P48754 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Brca1P48754 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC17.34■□□□□ 0.37
Brca1P48754 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC17.33■□□□□ 0.37
Brca1P48754 Gm14767-201ENSMUST00000121559 586 ntBASIC17.33■□□□□ 0.37
Brca1P48754 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC17.33■□□□□ 0.37
Brca1P48754 Gm16026-204ENSMUST00000162652 683 ntBASIC17.33■□□□□ 0.37
Brca1P48754 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC17.33■□□□□ 0.37
Brca1P48754 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC17.33■□□□□ 0.37
Brca1P48754 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Brca1P48754 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Brca1P48754 Gm18187-201ENSMUST00000196476 984 ntBASIC17.33■□□□□ 0.37
Brca1P48754 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Brca1P48754 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC17.33■□□□□ 0.37
Brca1P48754 Gm25857-201ENSMUST00000082788 129 ntBASIC17.33■□□□□ 0.37
Brca1P48754 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Brca1P48754 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Brca1P48754 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Brca1P48754 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Brca1P48754 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC17.33■□□□□ 0.36
Brca1P48754 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC17.33■□□□□ 0.36
Brca1P48754 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Brca1P48754 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Brca1P48754 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Brca1P48754 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Brca1P48754 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Brca1P48754 Gm6912-201ENSMUST00000117218 544 ntBASIC17.33■□□□□ 0.36
Brca1P48754 Gm8410-201ENSMUST00000117225 605 ntBASIC17.33■□□□□ 0.36
Brca1P48754 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Brca1P48754 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Brca1P48754 AC124732.1-201ENSMUST00000221551 910 ntBASIC17.33■□□□□ 0.36
Brca1P48754 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Brca1P48754 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Brca1P48754 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC17.32■□□□□ 0.36
Brca1P48754 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Brca1P48754 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Brca1P48754 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Brca1P48754 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.32■□□□□ 0.36
Brca1P48754 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Brca1P48754 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Brca1P48754 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC17.32■□□□□ 0.36
Brca1P48754 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC17.32■□□□□ 0.36
Brca1P48754 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Brca1P48754 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC17.32■□□□□ 0.36
Brca1P48754 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Brca1P48754 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Brca1P48754 Gm14026-201ENSMUST00000120625 1789 ntBASIC17.32■□□□□ 0.36
Brca1P48754 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Brca1P48754 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Brca1P48754 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Brca1P48754 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Brca1P48754 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC17.31■□□□□ 0.36
Brca1P48754 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Brca1P48754 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Brca1P48754 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Brca1P48754 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Brca1P48754 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC17.31■□□□□ 0.36
Brca1P48754 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC17.31■□□□□ 0.36
Brca1P48754 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Brca1P48754 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Brca1P48754 AC124751.1-201ENSMUST00000222716 1408 ntBASIC17.31■□□□□ 0.36
Brca1P48754 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Brca1P48754 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Brca1P48754 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Brca1P48754 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Brca1P48754 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Brca1P48754 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Brca1P48754 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Brca1P48754 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Brca1P48754 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Brca1P48754 Gm27989-201ENSMUST00000184721 107 ntBASIC17.31■□□□□ 0.36
Brca1P48754 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC17.31■□□□□ 0.36
Brca1P48754 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC17.31■□□□□ 0.36
Brca1P48754 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.3■□□□□ 0.36
Brca1P48754 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Brca1P48754 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Brca1P48754 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Brca1P48754 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Brca1P48754 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Brca1P48754 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Brca1P48754 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC17.3■□□□□ 0.36
Brca1P48754 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Brca1P48754 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Brca1P48754 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
Brca1P48754 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Brca1P48754 Gm8096-201ENSMUST00000209921 1591 ntBASIC17.29■□□□□ 0.36
Brca1P48754 Syt7-205ENSMUST00000224135 1557 ntBASIC17.29■□□□□ 0.36
Brca1P48754 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Brca1P48754 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Brca1P48754 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Brca1P48754 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.29■□□□□ 0.36
Brca1P48754 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms