Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfx2P48379 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Rfx2P48379 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfx2P48379 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfx2P48379 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC16.34■□□□□ 0.21
Rfx2P48379 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rfx2P48379 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rfx2P48379 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Rfx2P48379 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfx2P48379 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfx2P48379 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Rfx2P48379 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfx2P48379 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfx2P48379 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC16.33■□□□□ 0.2
Rfx2P48379 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC16.33■□□□□ 0.2
Rfx2P48379 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC16.33■□□□□ 0.2
Rfx2P48379 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rfx2P48379 Gm8000-201ENSMUST00000188378 592 ntBASIC16.33■□□□□ 0.2
Rfx2P48379 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rfx2P48379 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.33■□□□□ 0.2
Rfx2P48379 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfx2P48379 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Rfx2P48379 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfx2P48379 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfx2P48379 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfx2P48379 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rfx2P48379 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfx2P48379 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.33■□□□□ 0.2
Rfx2P48379 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfx2P48379 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfx2P48379 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.33■□□□□ 0.2
Rfx2P48379 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfx2P48379 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfx2P48379 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfx2P48379 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfx2P48379 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rfx2P48379 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rfx2P48379 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfx2P48379 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfx2P48379 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rfx2P48379 Gm3928-201ENSMUST00000121141 1307 ntBASIC16.32■□□□□ 0.2
Rfx2P48379 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Rfx2P48379 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfx2P48379 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC16.32■□□□□ 0.2
Rfx2P48379 Gm37935-201ENSMUST00000192012 982 ntBASIC16.32■□□□□ 0.2
Rfx2P48379 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfx2P48379 Gm43073-201ENSMUST00000198200 1189 ntBASIC16.32■□□□□ 0.2
Rfx2P48379 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rfx2P48379 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC16.32■□□□□ 0.2
Rfx2P48379 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.32■□□□□ 0.2
Rfx2P48379 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfx2P48379 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.32■□□□□ 0.2
Rfx2P48379 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC16.32■□□□□ 0.2
Rfx2P48379 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfx2P48379 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.32■□□□□ 0.2
Rfx2P48379 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfx2P48379 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfx2P48379 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfx2P48379 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.32■□□□□ 0.2
Rfx2P48379 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfx2P48379 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfx2P48379 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfx2P48379 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfx2P48379 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfx2P48379 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfx2P48379 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfx2P48379 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
Rfx2P48379 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.31■□□□□ 0.2
Rfx2P48379 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfx2P48379 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfx2P48379 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.31■□□□□ 0.2
Rfx2P48379 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rfx2P48379 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfx2P48379 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC16.31■□□□□ 0.2
Rfx2P48379 AC132104.2-201ENSMUST00000215011 266 ntBASIC16.31■□□□□ 0.2
Rfx2P48379 Psmb5-202ENSMUST00000227257 622 ntBASIC16.31■□□□□ 0.2
Rfx2P48379 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfx2P48379 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfx2P48379 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfx2P48379 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfx2P48379 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfx2P48379 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfx2P48379 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rfx2P48379 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfx2P48379 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfx2P48379 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfx2P48379 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx2P48379 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Rfx2P48379 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx2P48379 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx2P48379 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx2P48379 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx2P48379 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Rfx2P48379 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx2P48379 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.3■□□□□ 0.2
Rfx2P48379 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx2P48379 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx2P48379 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.3■□□□□ 0.2
Rfx2P48379 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.3■□□□□ 0.2
Rfx2P48379 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms