Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gm45251-201ENSMUST00000209486 1465 ntBASIC14.93□□□□□ -0.02
Sox18P43680 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox18P43680 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Sox18P43680 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox18P43680 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox18P43680 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.92□□□□□ -0.02
Sox18P43680 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox18P43680 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Sox18P43680 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox18P43680 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Sox18P43680 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Sox18P43680 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox18P43680 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
Sox18P43680 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox18P43680 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox18P43680 Gm13823-201ENSMUST00000119930 345 ntBASIC14.92□□□□□ -0.02
Sox18P43680 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.92□□□□□ -0.02
Sox18P43680 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Sox18P43680 Gm27430-201ENSMUST00000184585 107 ntBASIC14.92□□□□□ -0.02
Sox18P43680 Gm37319-201ENSMUST00000193500 636 ntBASIC14.92□□□□□ -0.02
Sox18P43680 Gm44333-201ENSMUST00000197168 107 ntBASIC14.92□□□□□ -0.02
Sox18P43680 Gm9682-201ENSMUST00000197505 556 ntBASIC14.92□□□□□ -0.02
Sox18P43680 Gm44044-201ENSMUST00000205178 1089 ntBASIC14.92□□□□□ -0.02
Sox18P43680 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.92□□□□□ -0.02
Sox18P43680 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Sox18P43680 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox18P43680 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox18P43680 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox18P43680 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox18P43680 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Sox18P43680 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox18P43680 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox18P43680 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Sox18P43680 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Sox18P43680 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox18P43680 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC14.91□□□□□ -0.02
Sox18P43680 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Sox18P43680 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.91□□□□□ -0.02
Sox18P43680 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Sox18P43680 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox18P43680 Gm12106-201ENSMUST00000116006 1200 ntBASIC14.91□□□□□ -0.02
Sox18P43680 Gm14127-201ENSMUST00000117906 678 ntBASIC14.91□□□□□ -0.02
Sox18P43680 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.91□□□□□ -0.02
Sox18P43680 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.91□□□□□ -0.02
Sox18P43680 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Sox18P43680 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Sox18P43680 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Sox18P43680 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Sox18P43680 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.91□□□□□ -0.02
Sox18P43680 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Sox18P43680 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox18P43680 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Sox18P43680 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Sox18P43680 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Sox18P43680 Gm26917-202ENSMUST00000192833 3329 ntBASIC14.91□□□□□ -0.02
Sox18P43680 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox18P43680 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Sox18P43680 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Sox18P43680 Gm38116-201ENSMUST00000193873 1533 ntBASIC14.91□□□□□ -0.02
Sox18P43680 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Sox18P43680 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Sox18P43680 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox18P43680 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox18P43680 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Sox18P43680 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Sox18P43680 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox18P43680 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox18P43680 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC14.9□□□□□ -0.02
Sox18P43680 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Sox18P43680 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Sox18P43680 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Sox18P43680 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Sox18P43680 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox18P43680 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox18P43680 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox18P43680 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Sox18P43680 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.9□□□□□ -0.02
Sox18P43680 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Sox18P43680 Gm7774-201ENSMUST00000200064 533 ntBASIC14.9□□□□□ -0.02
Sox18P43680 Thoc7-209ENSMUST00000225325 765 ntBASIC14.9□□□□□ -0.02
Sox18P43680 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox18P43680 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox18P43680 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Sox18P43680 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Sox18P43680 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox18P43680 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox18P43680 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox18P43680 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Sox18P43680 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Sox18P43680 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox18P43680 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
Sox18P43680 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox18P43680 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox18P43680 Clec4d-201ENSMUST00000032240 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox18P43680 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox18P43680 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Sox18P43680 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sox18P43680 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.89□□□□□ -0.03
Sox18P43680 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox18P43680 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms