Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
HttP42859 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC16.47■□□□□ 0.23
HttP42859 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
HttP42859 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
HttP42859 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
HttP42859 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HttP42859 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.47■□□□□ 0.23
HttP42859 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.47■□□□□ 0.23
HttP42859 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
HttP42859 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HttP42859 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HttP42859 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
HttP42859 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC16.47■□□□□ 0.23
HttP42859 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HttP42859 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HttP42859 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HttP42859 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HttP42859 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.46■□□□□ 0.23
HttP42859 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HttP42859 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HttP42859 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC16.46■□□□□ 0.23
HttP42859 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.46■□□□□ 0.23
HttP42859 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HttP42859 Gm15678-201ENSMUST00000117573 960 ntBASIC16.46■□□□□ 0.23
HttP42859 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
HttP42859 Gm43179-201ENSMUST00000198797 275 ntBASIC16.46■□□□□ 0.23
HttP42859 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
HttP42859 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.46■□□□□ 0.23
HttP42859 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HttP42859 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HttP42859 Gm5320-201ENSMUST00000207163 1519 ntBASIC16.46■□□□□ 0.22
HttP42859 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
HttP42859 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HttP42859 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
HttP42859 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
HttP42859 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HttP42859 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HttP42859 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HttP42859 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HttP42859 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HttP42859 Gm5566-201ENSMUST00000116118 459 ntBASIC16.45■□□□□ 0.22
HttP42859 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC16.45■□□□□ 0.22
HttP42859 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC16.45■□□□□ 0.22
HttP42859 Gm27920-201ENSMUST00000183953 96 ntBASIC16.45■□□□□ 0.22
HttP42859 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
HttP42859 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
HttP42859 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HttP42859 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HttP42859 Gm11543-201ENSMUST00000120758 370 ntBASIC16.45■□□□□ 0.22
HttP42859 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC16.45■□□□□ 0.22
HttP42859 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HttP42859 Gm9200-201ENSMUST00000118513 1354 ntBASIC16.45■□□□□ 0.22
HttP42859 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
HttP42859 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HttP42859 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HttP42859 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC16.44■□□□□ 0.22
HttP42859 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC16.44■□□□□ 0.22
HttP42859 Gm4959-201ENSMUST00000197271 1044 ntBASIC16.44■□□□□ 0.22
HttP42859 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HttP42859 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.44■□□□□ 0.22
HttP42859 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
HttP42859 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
HttP42859 Cd63-ps-201ENSMUST00000145417 875 ntBASIC16.44■□□□□ 0.22
HttP42859 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC16.44■□□□□ 0.22
HttP42859 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HttP42859 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HttP42859 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HttP42859 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HttP42859 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HttP42859 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HttP42859 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC16.43■□□□□ 0.22
HttP42859 Gm5303-201ENSMUST00000117943 1252 ntBASIC16.43■□□□□ 0.22
HttP42859 CT030657.3-201ENSMUST00000222707 1200 ntBASIC16.43■□□□□ 0.22
HttP42859 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.43■□□□□ 0.22
HttP42859 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
HttP42859 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HttP42859 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HttP42859 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HttP42859 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
HttP42859 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC16.43■□□□□ 0.22
HttP42859 Gm13392-201ENSMUST00000117708 150 ntBASIC16.43■□□□□ 0.22
HttP42859 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC16.43■□□□□ 0.22
HttP42859 Gm9719-201ENSMUST00000162765 543 ntBASIC16.43■□□□□ 0.22
HttP42859 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HttP42859 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HttP42859 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HttP42859 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HttP42859 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
HttP42859 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HttP42859 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
HttP42859 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HttP42859 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HttP42859 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HttP42859 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
HttP42859 Gm12957-201ENSMUST00000117835 377 ntBASIC16.43■□□□□ 0.22
HttP42859 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HttP42859 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HttP42859 Gm7286-201ENSMUST00000182691 1007 ntBASIC16.43■□□□□ 0.22
HttP42859 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC16.43■□□□□ 0.22
HttP42859 Gm20445-201ENSMUST00000061905 565 ntBASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms