Protein–RNA interactions for Protein: P29788

Vtn, Vitronectin, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VtnP29788 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VtnP29788 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VtnP29788 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VtnP29788 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VtnP29788 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
VtnP29788 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VtnP29788 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VtnP29788 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
VtnP29788 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.13□□□□□ -0.15
VtnP29788 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VtnP29788 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
VtnP29788 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VtnP29788 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
VtnP29788 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
VtnP29788 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
VtnP29788 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.12□□□□□ -0.15
VtnP29788 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VtnP29788 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VtnP29788 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VtnP29788 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VtnP29788 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.12□□□□□ -0.15
VtnP29788 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VtnP29788 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VtnP29788 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.12□□□□□ -0.15
VtnP29788 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VtnP29788 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VtnP29788 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
VtnP29788 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.12□□□□□ -0.15
VtnP29788 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.12□□□□□ -0.15
VtnP29788 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VtnP29788 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
VtnP29788 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VtnP29788 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VtnP29788 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VtnP29788 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VtnP29788 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.12□□□□□ -0.15
VtnP29788 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VtnP29788 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VtnP29788 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VtnP29788 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VtnP29788 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VtnP29788 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VtnP29788 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
VtnP29788 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
VtnP29788 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.11□□□□□ -0.15
VtnP29788 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VtnP29788 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
VtnP29788 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VtnP29788 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VtnP29788 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
VtnP29788 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VtnP29788 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VtnP29788 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VtnP29788 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.11□□□□□ -0.15
VtnP29788 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.11□□□□□ -0.15
VtnP29788 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.11□□□□□ -0.15
VtnP29788 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC14.11□□□□□ -0.15
VtnP29788 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.11□□□□□ -0.15
VtnP29788 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VtnP29788 Gm10060-201ENSMUST00000212002 111 ntBASIC14.11□□□□□ -0.15
VtnP29788 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VtnP29788 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.11□□□□□ -0.15
VtnP29788 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
VtnP29788 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VtnP29788 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
VtnP29788 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
VtnP29788 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VtnP29788 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VtnP29788 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VtnP29788 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
VtnP29788 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
VtnP29788 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
VtnP29788 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.11□□□□□ -0.15
VtnP29788 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VtnP29788 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
VtnP29788 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.11□□□□□ -0.15
VtnP29788 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
VtnP29788 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
VtnP29788 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
VtnP29788 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
VtnP29788 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VtnP29788 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VtnP29788 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
VtnP29788 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
VtnP29788 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VtnP29788 Gm1401-201ENSMUST00000122048 772 ntBASIC14.1□□□□□ -0.15
VtnP29788 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.1□□□□□ -0.15
VtnP29788 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.1□□□□□ -0.15
VtnP29788 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VtnP29788 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
VtnP29788 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
VtnP29788 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
VtnP29788 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VtnP29788 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
VtnP29788 Prob1-201ENSMUST00000097619 3021 ntBASIC14.1□□□□□ -0.15
VtnP29788 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VtnP29788 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VtnP29788 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VtnP29788 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
VtnP29788 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms