Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.79□□□□□ -0.04
Msx1P13297 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
Msx1P13297 Gm12497-201ENSMUST00000138778 237 ntBASIC14.79□□□□□ -0.04
Msx1P13297 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.79□□□□□ -0.04
Msx1P13297 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.79□□□□□ -0.04
Msx1P13297 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.79□□□□□ -0.04
Msx1P13297 Auts2-212ENSMUST00000178555 309 ntBASIC14.79□□□□□ -0.04
Msx1P13297 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC14.79□□□□□ -0.04
Msx1P13297 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Msx1P13297 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Msx1P13297 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Msx1P13297 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC14.79□□□□□ -0.04
Msx1P13297 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Msx1P13297 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Msx1P13297 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Msx1P13297 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Msx1P13297 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Msx1P13297 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Msx1P13297 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Msx1P13297 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Msx1P13297 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Msx1P13297 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Msx1P13297 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Msx1P13297 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Msx1P13297 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
Msx1P13297 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Msx1P13297 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msx1P13297 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msx1P13297 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
Msx1P13297 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msx1P13297 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Msx1P13297 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msx1P13297 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.78□□□□□ -0.04
Msx1P13297 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Msx1P13297 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Msx1P13297 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msx1P13297 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC14.78□□□□□ -0.04
Msx1P13297 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msx1P13297 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msx1P13297 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msx1P13297 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msx1P13297 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msx1P13297 Gm13036-201ENSMUST00000117799 748 ntBASIC14.78□□□□□ -0.04
Msx1P13297 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.78□□□□□ -0.04
Msx1P13297 Gm26308-201ENSMUST00000157768 69 ntBASIC14.78□□□□□ -0.04
Msx1P13297 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.78□□□□□ -0.04
Msx1P13297 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.78□□□□□ -0.04
Msx1P13297 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Msx1P13297 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msx1P13297 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.78□□□□□ -0.04
Msx1P13297 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msx1P13297 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Msx1P13297 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msx1P13297 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msx1P13297 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msx1P13297 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msx1P13297 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msx1P13297 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Msx1P13297 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Msx1P13297 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.78□□□□□ -0.04
Msx1P13297 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
Msx1P13297 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Msx1P13297 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Msx1P13297 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Msx1P13297 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Msx1P13297 AC154231.1-201ENSMUST00000220564 2175 ntBASIC14.77□□□□□ -0.04
Msx1P13297 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.77□□□□□ -0.04
Msx1P13297 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Msx1P13297 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Msx1P13297 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
Msx1P13297 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC14.77□□□□□ -0.04
Msx1P13297 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Msx1P13297 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Msx1P13297 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Msx1P13297 Gm8097-201ENSMUST00000117903 829 ntBASIC14.77□□□□□ -0.05
Msx1P13297 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.77□□□□□ -0.05
Msx1P13297 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
Msx1P13297 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Msx1P13297 Gm27628-201ENSMUST00000184911 107 ntBASIC14.77□□□□□ -0.05
Msx1P13297 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Msx1P13297 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Msx1P13297 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Msx1P13297 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Msx1P13297 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Msx1P13297 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Msx1P13297 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Msx1P13297 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Msx1P13297 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Msx1P13297 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Msx1P13297 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Msx1P13297 Dancr-204ENSMUST00000132389 2347 ntBASIC14.76□□□□□ -0.05
Msx1P13297 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Msx1P13297 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Msx1P13297 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
Msx1P13297 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Msx1P13297 Mir6404-201ENSMUST00000183699 94 ntBASIC14.76□□□□□ -0.05
Msx1P13297 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Msx1P13297 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Msx1P13297 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.76□□□□□ -0.05
Msx1P13297 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms