Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col1a1P11087 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col1a1P11087 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC18.12■□□□□ 0.49
Col1a1P11087 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col1a1P11087 Gm16026-204ENSMUST00000162652 683 ntBASIC18.12■□□□□ 0.49
Col1a1P11087 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Col1a1P11087 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col1a1P11087 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC18.12■□□□□ 0.49
Col1a1P11087 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col1a1P11087 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Col1a1P11087 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Col1a1P11087 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col1a1P11087 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Col1a1P11087 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Col1a1P11087 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC18.11■□□□□ 0.49
Col1a1P11087 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC18.11■□□□□ 0.49
Col1a1P11087 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC18.11■□□□□ 0.49
Col1a1P11087 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col1a1P11087 Hist1h2al-201ENSMUST00000091708 339 ntBASIC18.11■□□□□ 0.49
Col1a1P11087 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col1a1P11087 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Col1a1P11087 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Col1a1P11087 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
Col1a1P11087 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col1a1P11087 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col1a1P11087 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col1a1P11087 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC18.1■□□□□ 0.49
Col1a1P11087 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Col1a1P11087 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Col1a1P11087 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Col1a1P11087 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Col1a1P11087 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC18.1■□□□□ 0.49
Col1a1P11087 Gm29541-201ENSMUST00000191351 678 ntBASIC18.1■□□□□ 0.49
Col1a1P11087 Gtpbp10-211ENSMUST00000198799 648 ntBASIC18.1■□□□□ 0.49
Col1a1P11087 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col1a1P11087 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col1a1P11087 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col1a1P11087 Gm42934-201ENSMUST00000196920 1345 ntBASIC18.1■□□□□ 0.49
Col1a1P11087 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC18.1■□□□□ 0.49
Col1a1P11087 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC18.1■□□□□ 0.49
Col1a1P11087 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Col1a1P11087 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col1a1P11087 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col1a1P11087 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col1a1P11087 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Col1a1P11087 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC18.09■□□□□ 0.49
Col1a1P11087 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col1a1P11087 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col1a1P11087 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC18.09■□□□□ 0.49
Col1a1P11087 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Col1a1P11087 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC18.09■□□□□ 0.49
Col1a1P11087 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC18.09■□□□□ 0.49
Col1a1P11087 Gm38225-201ENSMUST00000194001 393 ntBASIC18.09■□□□□ 0.49
Col1a1P11087 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col1a1P11087 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col1a1P11087 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Col1a1P11087 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col1a1P11087 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col1a1P11087 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col1a1P11087 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col1a1P11087 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC18.09■□□□□ 0.49
Col1a1P11087 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Col1a1P11087 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Col1a1P11087 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Col1a1P11087 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC18.08■□□□□ 0.49
Col1a1P11087 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.08■□□□□ 0.49
Col1a1P11087 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Col1a1P11087 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Col1a1P11087 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Col1a1P11087 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Col1a1P11087 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Col1a1P11087 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Col1a1P11087 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Col1a1P11087 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Col1a1P11087 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col1a1P11087 Gm8410-201ENSMUST00000117225 605 ntBASIC18.07■□□□□ 0.48
Col1a1P11087 Gm27680-201ENSMUST00000184192 160 ntBASIC18.07■□□□□ 0.48
Col1a1P11087 Gm28630-201ENSMUST00000187806 498 ntBASIC18.07■□□□□ 0.48
Col1a1P11087 Gm6888-201ENSMUST00000221983 706 ntBASIC18.07■□□□□ 0.48
Col1a1P11087 AC124751.1-201ENSMUST00000222716 1408 ntBASIC18.07■□□□□ 0.48
Col1a1P11087 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col1a1P11087 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col1a1P11087 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col1a1P11087 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Col1a1P11087 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Col1a1P11087 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.07■□□□□ 0.48
Col1a1P11087 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col1a1P11087 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col1a1P11087 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC18.07■□□□□ 0.48
Col1a1P11087 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col1a1P11087 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col1a1P11087 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col1a1P11087 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Col1a1P11087 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col1a1P11087 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col1a1P11087 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Col1a1P11087 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Col1a1P11087 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC18.07■□□□□ 0.48
Col1a1P11087 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Col1a1P11087 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms