Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hoxc9P09633 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Hoxc9P09633 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC20.14■□□□□ 0.81
Hoxc9P09633 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC20.14■□□□□ 0.81
Hoxc9P09633 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC20.14■□□□□ 0.81
Hoxc9P09633 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hoxc9P09633 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hoxc9P09633 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Hoxc9P09633 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC20.13■□□□□ 0.81
Hoxc9P09633 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
Hoxc9P09633 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hoxc9P09633 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hoxc9P09633 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Hoxc9P09633 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hoxc9P09633 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hoxc9P09633 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hoxc9P09633 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC20.13■□□□□ 0.81
Hoxc9P09633 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC20.13■□□□□ 0.81
Hoxc9P09633 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hoxc9P09633 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Hoxc9P09633 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hoxc9P09633 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hoxc9P09633 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Hoxc9P09633 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hoxc9P09633 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hoxc9P09633 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hoxc9P09633 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hoxc9P09633 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Hoxc9P09633 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Hoxc9P09633 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC20.12■□□□□ 0.81
Hoxc9P09633 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Hoxc9P09633 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Hoxc9P09633 Gm22175-201ENSMUST00000175007 78 ntBASIC20.12■□□□□ 0.81
Hoxc9P09633 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hoxc9P09633 Gm27321-201ENSMUST00000185021 205 ntBASIC20.12■□□□□ 0.81
Hoxc9P09633 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC20.12■□□□□ 0.81
Hoxc9P09633 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hoxc9P09633 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Hoxc9P09633 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Hoxc9P09633 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Hoxc9P09633 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hoxc9P09633 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hoxc9P09633 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hoxc9P09633 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hoxc9P09633 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hoxc9P09633 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hoxc9P09633 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Hoxc9P09633 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC20.11■□□□□ 0.81
Hoxc9P09633 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hoxc9P09633 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC20.11■□□□□ 0.81
Hoxc9P09633 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
Hoxc9P09633 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Hoxc9P09633 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Hoxc9P09633 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Hoxc9P09633 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hoxc9P09633 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hoxc9P09633 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hoxc9P09633 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hoxc9P09633 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hoxc9P09633 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Hoxc9P09633 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Hoxc9P09633 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Hoxc9P09633 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hoxc9P09633 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Hoxc9P09633 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC20.1■□□□□ 0.81
Hoxc9P09633 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Hoxc9P09633 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC20.1■□□□□ 0.81
Hoxc9P09633 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC20.1■□□□□ 0.81
Hoxc9P09633 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Hoxc9P09633 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC20.1■□□□□ 0.81
Hoxc9P09633 Gm7774-201ENSMUST00000200064 533 ntBASIC20.1■□□□□ 0.81
Hoxc9P09633 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hoxc9P09633 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hoxc9P09633 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC20.1■□□□□ 0.81
Hoxc9P09633 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hoxc9P09633 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Hoxc9P09633 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hoxc9P09633 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hoxc9P09633 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hoxc9P09633 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hoxc9P09633 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hoxc9P09633 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hoxc9P09633 Gm13127-201ENSMUST00000118978 1389 ntBASIC20.09■□□□□ 0.81
Hoxc9P09633 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hoxc9P09633 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
Hoxc9P09633 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hoxc9P09633 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hoxc9P09633 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC20.09■□□□□ 0.81
Hoxc9P09633 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
Hoxc9P09633 Gm12017-201ENSMUST00000122453 1003 ntBASIC20.09■□□□□ 0.81
Hoxc9P09633 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Hoxc9P09633 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Hoxc9P09633 Mir7023-201ENSMUST00000185093 64 ntBASIC20.09■□□□□ 0.81
Hoxc9P09633 AC124732.2-201ENSMUST00000221977 316 ntBASIC20.09■□□□□ 0.81
Hoxc9P09633 AC131187.1-201ENSMUST00000224567 809 ntBASIC20.09■□□□□ 0.81
Hoxc9P09633 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Hoxc9P09633 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hoxc9P09633 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hoxc9P09633 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Hoxc9P09633 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms