Protein–RNA interactions for Protein: P09631

Hoxa9, Homeobox protein Hox-A9, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa9P09631 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC15.66■□□□□ 0.1
Hoxa9P09631 AC154572.2-201ENSMUST00000225105 997 ntBASIC15.66■□□□□ 0.1
Hoxa9P09631 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxa9P09631 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Hoxa9P09631 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxa9P09631 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxa9P09631 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxa9P09631 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxa9P09631 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxa9P09631 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Hoxa9P09631 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxa9P09631 Gm5366-201ENSMUST00000215494 1338 ntBASIC15.66■□□□□ 0.1
Hoxa9P09631 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.65■□□□□ 0.1
Hoxa9P09631 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC15.65■□□□□ 0.1
Hoxa9P09631 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.65■□□□□ 0.1
Hoxa9P09631 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Hoxa9P09631 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hoxa9P09631 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Hoxa9P09631 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hoxa9P09631 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Hoxa9P09631 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hoxa9P09631 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hoxa9P09631 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hoxa9P09631 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Hoxa9P09631 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC15.65■□□□□ 0.1
Hoxa9P09631 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC15.65■□□□□ 0.1
Hoxa9P09631 Gm11025-201ENSMUST00000140773 466 ntBASIC15.65■□□□□ 0.1
Hoxa9P09631 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC15.65■□□□□ 0.1
Hoxa9P09631 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hoxa9P09631 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hoxa9P09631 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Hoxa9P09631 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hoxa9P09631 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hoxa9P09631 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.65■□□□□ 0.1
Hoxa9P09631 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Hoxa9P09631 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hoxa9P09631 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.65■□□□□ 0.1
Hoxa9P09631 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hoxa9P09631 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hoxa9P09631 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Hoxa9P09631 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.64■□□□□ 0.1
Hoxa9P09631 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hoxa9P09631 Best4-ps-201ENSMUST00000129783 1380 ntBASIC15.64■□□□□ 0.09
Hoxa9P09631 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hoxa9P09631 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Hoxa9P09631 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.64■□□□□ 0.09
Hoxa9P09631 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Hoxa9P09631 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Hoxa9P09631 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hoxa9P09631 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hoxa9P09631 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hoxa9P09631 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hoxa9P09631 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hoxa9P09631 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hoxa9P09631 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC15.64■□□□□ 0.09
Hoxa9P09631 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hoxa9P09631 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC15.64■□□□□ 0.09
Hoxa9P09631 Chchd1-203ENSMUST00000224633 557 ntBASIC15.64■□□□□ 0.09
Hoxa9P09631 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.64■□□□□ 0.09
Hoxa9P09631 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Hoxa9P09631 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hoxa9P09631 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC15.64■□□□□ 0.09
Hoxa9P09631 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Hoxa9P09631 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hoxa9P09631 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hoxa9P09631 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Hoxa9P09631 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Hoxa9P09631 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Hoxa9P09631 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.63■□□□□ 0.09
Hoxa9P09631 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hoxa9P09631 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
Hoxa9P09631 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hoxa9P09631 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hoxa9P09631 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Hoxa9P09631 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hoxa9P09631 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Hoxa9P09631 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hoxa9P09631 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Hoxa9P09631 AC158538.2-201ENSMUST00000225455 906 ntBASIC15.63■□□□□ 0.09
Hoxa9P09631 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.63■□□□□ 0.09
Hoxa9P09631 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Hoxa9P09631 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hoxa9P09631 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hoxa9P09631 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Hoxa9P09631 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Hoxa9P09631 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hoxa9P09631 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hoxa9P09631 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
Hoxa9P09631 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Hoxa9P09631 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Hoxa9P09631 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hoxa9P09631 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hoxa9P09631 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Hoxa9P09631 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Hoxa9P09631 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hoxa9P09631 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Hoxa9P09631 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Hoxa9P09631 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hoxa9P09631 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hoxa9P09631 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms