Protein–RNA interactions for Protein: P08775

Polr2a, DNA-directed RNA polymerase II subunit RPB1, mousemouse

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2aP08775 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Polr2aP08775 Gm12138-201ENSMUST00000122180 951 ntBASIC17.62■□□□□ 0.41
Polr2aP08775 AL593843.1-201ENSMUST00000195891 145 ntBASIC17.62■□□□□ 0.41
Polr2aP08775 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Polr2aP08775 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Polr2aP08775 Gm42466-201ENSMUST00000202099 1301 ntBASIC17.62■□□□□ 0.41
Polr2aP08775 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Polr2aP08775 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Polr2aP08775 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Polr2aP08775 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Polr2aP08775 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Polr2aP08775 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Polr2aP08775 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Polr2aP08775 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Polr2aP08775 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Polr2aP08775 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC17.61■□□□□ 0.41
Polr2aP08775 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Polr2aP08775 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Polr2aP08775 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC17.61■□□□□ 0.41
Polr2aP08775 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Polr2aP08775 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC17.61■□□□□ 0.41
Polr2aP08775 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC17.61■□□□□ 0.41
Polr2aP08775 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Polr2aP08775 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Polr2aP08775 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.61■□□□□ 0.41
Polr2aP08775 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC17.61■□□□□ 0.41
Polr2aP08775 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Polr2aP08775 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.61■□□□□ 0.41
Polr2aP08775 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Polr2aP08775 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Polr2aP08775 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Polr2aP08775 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Polr2aP08775 Gm13216-201ENSMUST00000117145 591 ntBASIC17.6■□□□□ 0.41
Polr2aP08775 Gm12859-201ENSMUST00000117834 427 ntBASIC17.6■□□□□ 0.41
Polr2aP08775 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Polr2aP08775 Klk2-ps-201ENSMUST00000205342 571 ntBASIC17.6■□□□□ 0.41
Polr2aP08775 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Polr2aP08775 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Polr2aP08775 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Polr2aP08775 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Polr2aP08775 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Polr2aP08775 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Polr2aP08775 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC17.6■□□□□ 0.41
Polr2aP08775 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Polr2aP08775 Gm44344-201ENSMUST00000200287 129 ntBASIC17.6■□□□□ 0.41
Polr2aP08775 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Polr2aP08775 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Polr2aP08775 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Polr2aP08775 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Polr2aP08775 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Polr2aP08775 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Polr2aP08775 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Polr2aP08775 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC17.6■□□□□ 0.41
Polr2aP08775 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Polr2aP08775 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Polr2aP08775 Gm14026-201ENSMUST00000120625 1789 ntBASIC17.59■□□□□ 0.41
Polr2aP08775 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Polr2aP08775 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Polr2aP08775 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Polr2aP08775 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC17.59■□□□□ 0.41
Polr2aP08775 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC17.59■□□□□ 0.41
Polr2aP08775 Gm5357-201ENSMUST00000212720 1924 ntBASIC17.59■□□□□ 0.41
Polr2aP08775 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Polr2aP08775 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Polr2aP08775 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Polr2aP08775 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.59■□□□□ 0.41
Polr2aP08775 Gm15163-201ENSMUST00000120749 1302 ntBASIC17.59■□□□□ 0.41
Polr2aP08775 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Polr2aP08775 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC17.59■□□□□ 0.41
Polr2aP08775 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC17.59■□□□□ 0.41
Polr2aP08775 Gm15483-201ENSMUST00000120338 456 ntBASIC17.59■□□□□ 0.41
Polr2aP08775 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Polr2aP08775 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC17.59■□□□□ 0.41
Polr2aP08775 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Polr2aP08775 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Polr2aP08775 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Polr2aP08775 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Polr2aP08775 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Polr2aP08775 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Polr2aP08775 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC17.58■□□□□ 0.4
Polr2aP08775 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Polr2aP08775 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
Polr2aP08775 Gm24543-201ENSMUST00000103867 82 ntBASIC17.58■□□□□ 0.4
Polr2aP08775 Gm6539-201ENSMUST00000119157 1064 ntBASIC17.58■□□□□ 0.4
Polr2aP08775 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC17.58■□□□□ 0.4
Polr2aP08775 Gm8116-201ENSMUST00000182917 1201 ntBASIC17.58■□□□□ 0.4
Polr2aP08775 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Polr2aP08775 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Polr2aP08775 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Polr2aP08775 Gm13337-201ENSMUST00000119183 1594 ntBASIC17.58■□□□□ 0.4
Polr2aP08775 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Polr2aP08775 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Polr2aP08775 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Polr2aP08775 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC17.57■□□□□ 0.4
Polr2aP08775 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
Polr2aP08775 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Polr2aP08775 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Polr2aP08775 Gm18766-201ENSMUST00000189811 808 ntBASIC17.57■□□□□ 0.4
Polr2aP08775 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Polr2aP08775 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms