Protein–RNA interactions for Protein: P08553

Nefm, Neurofilament medium polypeptide, mousemouse

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NefmP08553 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
NefmP08553 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
NefmP08553 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
NefmP08553 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
NefmP08553 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC23.04■■□□□ 1.28
NefmP08553 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
NefmP08553 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
NefmP08553 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
NefmP08553 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
NefmP08553 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC23.04■■□□□ 1.28
NefmP08553 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
NefmP08553 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
NefmP08553 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
NefmP08553 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC23.04■■□□□ 1.28
NefmP08553 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
NefmP08553 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
NefmP08553 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
NefmP08553 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
NefmP08553 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
NefmP08553 Gm37736-201ENSMUST00000193564 2802 ntBASIC23.04■■□□□ 1.28
NefmP08553 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC23.04■■□□□ 1.28
NefmP08553 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
NefmP08553 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
NefmP08553 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
NefmP08553 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
NefmP08553 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
NefmP08553 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
NefmP08553 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
NefmP08553 Gm6433-201ENSMUST00000118634 875 ntBASIC23.03■■□□□ 1.28
NefmP08553 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
NefmP08553 Krtap5-1-202ENSMUST00000188274 742 ntBASIC23.03■■□□□ 1.28
NefmP08553 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
NefmP08553 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
NefmP08553 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
NefmP08553 Gm16425-201ENSMUST00000118143 3130 ntBASIC23.03■■□□□ 1.28
NefmP08553 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
NefmP08553 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
NefmP08553 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
NefmP08553 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
NefmP08553 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
NefmP08553 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC23.03■■□□□ 1.28
NefmP08553 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NefmP08553 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NefmP08553 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
NefmP08553 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NefmP08553 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NefmP08553 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NefmP08553 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
NefmP08553 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
NefmP08553 Gm15565-201ENSMUST00000118890 427 ntBASIC23.02■■□□□ 1.28
NefmP08553 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
NefmP08553 Gm9013-201ENSMUST00000132939 882 ntBASIC23.02■■□□□ 1.28
NefmP08553 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NefmP08553 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NefmP08553 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
NefmP08553 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC23.02■■□□□ 1.28
NefmP08553 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NefmP08553 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NefmP08553 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
NefmP08553 Gm37728-201ENSMUST00000195025 2292 ntBASIC23.02■■□□□ 1.28
NefmP08553 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NefmP08553 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NefmP08553 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NefmP08553 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC23.01■■□□□ 1.27
NefmP08553 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
NefmP08553 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NefmP08553 Gm25406-201ENSMUST00000157599 105 ntBASIC23.01■■□□□ 1.27
NefmP08553 Gm1818-201ENSMUST00000169406 1184 ntBASIC23.01■■□□□ 1.27
NefmP08553 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
NefmP08553 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
NefmP08553 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NefmP08553 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NefmP08553 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
NefmP08553 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NefmP08553 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NefmP08553 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NefmP08553 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NefmP08553 Gm13337-201ENSMUST00000119183 1594 ntBASIC23.01■■□□□ 1.27
NefmP08553 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NefmP08553 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
NefmP08553 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
NefmP08553 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NefmP08553 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NefmP08553 Gm43352-201ENSMUST00000196419 3065 ntBASIC23■■□□□ 1.27
NefmP08553 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NefmP08553 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
NefmP08553 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NefmP08553 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NefmP08553 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NefmP08553 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NefmP08553 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC23■■□□□ 1.27
NefmP08553 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
NefmP08553 Gm6623-201ENSMUST00000173570 544 ntBASIC23■■□□□ 1.27
NefmP08553 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC23■■□□□ 1.27
NefmP08553 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC23■■□□□ 1.27
NefmP08553 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
NefmP08553 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC23■■□□□ 1.27
NefmP08553 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NefmP08553 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC23■■□□□ 1.27
NefmP08553 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms